chr3 : 114,519,524 114,519,826
302 bp 74 TFs 1 linked gene
This 302 bp open chromatin element is linked to ZBTB20-AS5 and is bound by 74 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZBTB20-AS5 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:114,514,524 – 114,524,826
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 224 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 302 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 302 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 182 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 151 bp overlap
BRD4 5 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 207 bp overlap
ChIP K-562 GSE140325.BRD4.K-562 142 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 164 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 119 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 159 bp overlap
CEBPB 3 datasets
ChIP A549 ENCFF235AIY 235 bp overlap
ChIP IMR-90 ENCFF468UGY 207 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 126 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 273 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 242 bp overlap
CREB1 10 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 120 bp overlap
ChIP GM12878 ENCFF870CVH 202 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 216 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 190 bp overlap
ChIP H1 ENCFF955PMP 297 bp overlap
ChIP LNCaP GSE63034.CREB1.LNCaP 202 bp overlap
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 161 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 299 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 302 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 182 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 249 bp overlap
CREM 2 datasets
ChIP GM12878 ENCFF391UGE 91 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 213 bp overlap
CTCF 18 datasets
ChIP AG04450 ENCFF116DJL 277 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 149 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 103 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 114 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 118 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 122 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 165 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 220 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 109 bp overlap
ChIP islet ERP004003.CTCF.islet 121 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 244 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 203 bp overlap
ChIP neural cell ENCFF335ADI 174 bp overlap
ChIP neural cell ENCFF335ADI 302 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 219 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 140 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 116 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 122 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 170 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 163 bp overlap
EP300 8 datasets
ChIP GM12878 ENCFF242HCG 276 bp overlap
ChIP H1 ENCFF927IYK 239 bp overlap
ChIP H1 ENCFF937OPV 205 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 226 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 153 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 302 bp overlap
ChIP neural cell ENCFF442QNK 257 bp overlap
ChIP neural cell ENCFF442QNK 246 bp overlap
EVI1 1 dataset
ChIP SKH1_10d GSE87283.EVI1.SKH1_10d 178 bp overlap
FOXJ2 2 datasets
ChIP K-562 ENCSR847LBF.FOXJ2.K-562 286 bp overlap
ChIP K562 ENCFF457GZC 302 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 211 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 182 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 302 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 166 bp overlap
MAX 2 datasets
ChIP H1 ENCFF601FOM 279 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 231 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 107 bp overlap
MXI1 2 datasets
ChIP neural ENCSR934NHU.MXI1.neural 302 bp overlap
ChIP neural cell ENCFF623HQN 302 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 254 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 53 bp overlap
NCOR2 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 153 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 126 bp overlap
NFIB 1 dataset
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NFYB 2 datasets
ChIP GM12878 ENCFF474DNH 228 bp overlap
ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 173 bp overlap
NFYC 1 dataset
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 149 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 119 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 103 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 244 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 142 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 262 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 213 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 302 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 302 bp overlap
ChIP neural cell ENCFF564MOT 226 bp overlap
RBPJ 3 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 287 bp overlap
RELA 1 dataset
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 196 bp overlap
REST 1 dataset
ChIP neural cell ENCFF882LXX 302 bp overlap
RFX1 9 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 302 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 286 bp overlap
ChIP K562 ENCFF421AVO 272 bp overlap
ChIP K562 ENCFF809XVG 204 bp overlap
ChIP MCF-7 ENCFF782EZS 261 bp overlap
ChIP MCF-7 ENCFF973QAD 152 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 302 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 274 bp overlap
RFX2 2 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
RFX5 20 datasets
ChIP A-549 ENCSR064LJN.RFX5.A-549 302 bp overlap
ChIP A549 ENCFF220PEX 302 bp overlap
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
ChIP GM12878 ENCFF768MIX 252 bp overlap
ChIP GM12878 ENCSR000DZW.RFX5.GM12878 255 bp overlap
ChIP H1 ENCFF605EGG 260 bp overlap
ChIP HeLa-S3 ENCFF703XPB 116 bp overlap
ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 253 bp overlap
ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 279 bp overlap
ChIP HepG2 ENCFF065UQI 220 bp overlap
ChIP IMR-90 ENCFF886KPO 212 bp overlap
ChIP IMR-90 ENCSR000EFD.RFX5.IMR-90 302 bp overlap
ChIP K-562 ENCSR000EGO.RFX5.K-562 162 bp overlap
ChIP K562 ENCFF734TCX 302 bp overlap
ChIP MCF-7 ENCFF983ILY 302 bp overlap
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 302 bp overlap
ChIP SK-N-SH ENCFF755HLO 253 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 302 bp overlap
ChIP WA01 ENCSR000ECF.RFX5.WA01 302 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 77 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 97 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 121 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 71 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 75 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 302 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 302 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 176 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 302 bp overlap
ChIP neural cell ENCFF795YGY 149 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 249 bp overlap
SP1 3 datasets
ChIP GM12878 ENCSR000BHK.SP1.GM12878 134 bp overlap
ChIP H1 ENCFF263FUH 282 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 207 bp overlap
SPI1 3 datasets
ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 192 bp overlap
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 223 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 100 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 179 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 67 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 197 bp overlap
TEAD4 1 dataset
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 258 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TP63 1 dataset
Motif DE_12h DE_12h-TP63_MA0525.2 18 bp overlap
TP73 1 dataset
Motif DE_12h DE_12h-TP73_MA0861.2 16 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 112 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 244 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 156 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 216 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap