chr3 : 62,376,904 – 62,377,482
578 bp 84 TFs 1 linked gene
This 578 bp open chromatin element is linked to FEZF2 and is bound by 84 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FEZF2 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:62,371,904 – 62,382,482
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 174 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 526 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 375 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 277 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 578 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 548 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 578 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 135 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 309 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 151 bp overlap
BRD4 8 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 483 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 256 bp overlap
ChIP MCF-7 GSE55921.BRD4.MCF-7 542 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 359 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 578 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 574 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 571 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 578 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 578 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 83 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 578 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 165 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 407 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 417 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 578 bp overlap
CTCF 2 datasets
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 386 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 164 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 313 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 176 bp overlap
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 450 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 188 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 452 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 559 bp overlap
ERG 4 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 200 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 239 bp overlap
ChIP K-562 GSE23730.ERG.K-562 169 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 578 bp overlap
ESR1 19 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 436 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 426 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 199 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 570 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 540 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 346 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 578 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 578 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 557 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 578 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 554 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 500 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 153 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 361 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 578 bp overlap
ChIP MCF-7_ethanol GSE107476.ESR1.MCF-7_ethanol 269 bp overlap
ChIP MCF-7_shCTRL GSE132432.ESR1.MCF-7_shCTRL 479 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 199 bp overlap
ChIP NCI-H3396_ETOH GSE32349.ESR1.NCI-H3396_ETOH 353 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 215 bp overlap
ESRRA 1 dataset
ChIP MCF-7 ENCFF569SII 351 bp overlap
EZH2 28 datasets
ChIP GM23338 ENCFF613YON 460 bp overlap
ChIP GM23338 ENCFF613YON 166 bp overlap
ChIP GM23338 ENCFF886DXX 578 bp overlap
ChIP H1 ENCFF232NZA 578 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 578 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 400 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 578 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 550 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 240 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 578 bp overlap
ChIP T98G GSE112240.EZH2.T98G 254 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 420 bp overlap
ChIP astrocyte ENCFF365JTP 217 bp overlap
ChIP astrocyte ENCFF365JTP 313 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 578 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 578 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 570 bp overlap
ChIP fibroblast of lung ENCFF479BAW 569 bp overlap
ChIP fibroblast of lung ENCFF479BAW 327 bp overlap
ChIP hESC GSE113817.EZH2.hESC 548 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 129 bp overlap
ChIP hepatocyte ENCFF552DZB 578 bp overlap
ChIP keratinocyte ENCFF070STK 388 bp overlap
ChIP keratinocyte ENCFF070STK 322 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 296 bp overlap
ChIP neural progenitor cell ENCFF018MKA 578 bp overlap
ChIP neural progenitor cell ENCFF472NFV 578 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 308 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 180 bp overlap
GATA2 1 dataset
ChIP ME-1 GSE46044.GATA2.ME-1 226 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 312 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 187 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 248 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 162 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 578 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 578 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 578 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 553 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 574 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 554 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 450 bp overlap
KDM5B 1 dataset
ChIP MCF-7 GSE46055.KDM5B.MCF-7 568 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 177 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 166 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 110 bp overlap
ChIP WTC11 ENCFF223QFY 341 bp overlap
ChIP WTC11 ENCFF223QFY 552 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 151 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 578 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 197 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 228 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 510 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 331 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 504 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 578 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 220 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 478 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 311 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 383 bp overlap
ONECUT1 2 datasets
ChIP liver ERP002306.ONECUT1.liver 58 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 146 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 75 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 193 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 226 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 206 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 460 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 281 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 578 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 578 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 351 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 344 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 367 bp overlap
ChIP MCF-7 ENCFF782EZS 168 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 578 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 62 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 578 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 578 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 320 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 159 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 505 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 328 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 235 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 578 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 235 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 377 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 535 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 326 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 384 bp overlap
SMARCA4 2 datasets
ChIP MCF-7 GSE128445.SMARCA4.MCF-7 363 bp overlap
ChIP MCF-7_shJUN GSE128445.SMARCA4.MCF-7_shJUN 339 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 99 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 578 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 578 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 512 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 269 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 254 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 266 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 254 bp overlap
SUZ12 10 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 183 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 578 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 431 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 296 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 50 bp overlap
ChIP NT2/D1 ENCFF574SXS 332 bp overlap
ChIP NT2/D1 ENCFF574SXS 207 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 578 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 578 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 218 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 227 bp overlap
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 403 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 143 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 315 bp overlap
TFAP2C 1 dataset
ChIP WA09 GSE105081.TFAP2C.WA09 204 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 327 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 50 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 578 bp overlap
TRIM28 2 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 308 bp overlap
USF1 2 datasets
ChIP WTC11 ENCFF699QGS 344 bp overlap
ChIP WTC11 ENCFF699QGS 344 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 558 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 203 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 578 bp overlap
ZFX 3 datasets
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 405 bp overlap
ChIP HCT-116 GSE102616.ZFX.HCT-116 409 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 578 bp overlap
ZNF143 1 dataset
ChIP WTC11 ENCFF249JUK 384 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 174 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 497 bp overlap
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