chr3 : 14,370,497 14,371,093
596 bp 82 TFs 0 linked genes
This 596 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:14,365,497 – 14,376,093
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP ERP003503.AR.LNCaP 136 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 424 bp overlap
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 353 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 271 bp overlap
BCOR 1 dataset
ChIP K562 ENCFF343XWA 133 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 64 bp overlap
CTCF 2 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 449 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 352 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 195 bp overlap
ChIP BLaER1 ENCFF335XTP 265 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 243 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 185 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 285 bp overlap
EP300 1 dataset
ChIP upper lobe of left lung ENCFF024QBJ 118 bp overlap
ESR1 50 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 109 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 192 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 363 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 81 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 215 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 596 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 60 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 87 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 64 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 112 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 112 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 89 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 89 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 95 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 63 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 80 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 55 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 94 bp overlap
ChIP MCF-7_E2 GSE108883.ESR1.MCF-7_E2 68 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 123 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 162 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 92 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 64 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 61 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 120 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 97 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 176 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 62 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 115 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 66 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 159 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 177 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 115 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 523 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 91 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 433 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 70 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 62 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 186 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 187 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 179 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 506 bp overlap
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 204 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 137 bp overlap
ChIP breast_tumor_Male_18 GSE104399.ESR1.breast_tumor_Male_18 59 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 168 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 67 bp overlap
ChIP breast_tumor_Male_7 GSE104399.ESR1.breast_tumor_Male_7 106 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 86 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 253 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 211 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 98 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 91 bp overlap
ESR1_Y537S 4 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 62 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 83 bp overlap
ChIP T-47D_dox GSE94493.ESR1_Y537S.T-47D_dox 71 bp overlap
ChIP T-47D_dox_E2 GSE94493.ESR1_Y537S.T-47D_dox_E2 84 bp overlap
ESRRA 7 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 139 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 134 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 170 bp overlap
ChIP HepG2 ENCFF033DVS 305 bp overlap
ChIP HepG2 ENCFF033DVS 485 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 74 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 143 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 210 bp overlap
FOXA1 27 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 136 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 164 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 179 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 150 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 63 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 96 bp overlap
ChIP 22Rv1_TFS GSE123618.FOXA1.22Rv1_TFS 69 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 160 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 326 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 157 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 101 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 55 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 245 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 136 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 118 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 209 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 141 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 150 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 260 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 120 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 71 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 127 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 269 bp overlap
ChIP liver ERP002306.FOXA1.liver 156 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 472 bp overlap
ChIP prostate_2078 GSE130408.FOXA1.prostate_2078 216 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 220 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 415 bp overlap
ChIP DE DE-FOXA2-2 440 bp overlap
ChIP HepG2 ENCFF570ABM 91 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 119 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 250 bp overlap
ChIP liver ENCFF877SFI 212 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 138 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 397 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 250 bp overlap
ChIP DE DE-GATA6-2 278 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 91 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 596 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 208 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 253 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 124 bp overlap
ChIP K562 ENCFF195BET 177 bp overlap
HNF4A 3 datasets
ChIP HepG2 ENCFF146SSF 125 bp overlap
ChIP liver ENCFF354NRH 180 bp overlap
ChIP liver ERP002306.HNF4A.liver 90 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 144 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 100 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 147 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 144 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 106 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 157 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 232 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 129 bp overlap
ChIP K562 ENCFF398VJM 403 bp overlap
ChIP K562 ENCFF398VJM 485 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 219 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 192 bp overlap
NKX2-1 1 dataset
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 342 bp overlap
NR2F1 1 dataset
ChIP HepG2 ENCFF953UJL 127 bp overlap
NR2F6 1 dataset
ChIP HepG2 ENCFF514UJI 118 bp overlap
NR5A1 1 dataset
ChIP HepG2 ENCFF970YZO 109 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 307 bp overlap
POLR2A 3 datasets
ChIP gastrocnemius medialis ENCFF145VIB 225 bp overlap
ChIP prostate gland ENCFF832RQK 309 bp overlap
ChIP prostate gland ENCFF881OMH 243 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 266 bp overlap
PTBP1 2 datasets
ChIP K-562 GSE120104.PTBP1.K-562 86 bp overlap
ChIP K-562 ENCSR948KMB.PTBP1.K-562 80 bp overlap
RAD21 1 dataset
ChIP HepG2 ENCFF360ZSW 137 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 118 bp overlap
RBM25 1 dataset
ChIP K-562 ENCSR791OZM.RBM25.K-562 127 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 190 bp overlap
RCOR1 2 datasets
ChIP HeLa GSE45441.RCOR1.HeLa 136 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 125 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 181 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 242 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 115 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 166 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 229 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 56 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 178 bp overlap
SMARCA4 4 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 169 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 57 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 109 bp overlap
SMARCC1 1 dataset
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 176 bp overlap
SP1 2 datasets
ChIP HEK293 GSE76494.SP1.HEK293 147 bp overlap
ChIP liver ENCFF597LFJ 199 bp overlap
SREBF1 2 datasets
ChIP MCF-7 ENCFF254QOR 263 bp overlap
ChIP TE-5 GSE143803.SREBF1.TE-5 206 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 81 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 397 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 202 bp overlap
TFAP4 3 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 103 bp overlap
ChIP HepG2 ENCFF932XOY 192 bp overlap
ChIP K562 ENCFF727PXG 490 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF584VSB 501 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 96 bp overlap
TP63 9 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 341 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 323 bp overlap
ChIP TT GSE46837.TP63.TT 166 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 164 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 291 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 340 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 252 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 242 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 220 bp overlap
USF1 4 datasets
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 152 bp overlap
ChIP HepG2 ENCFF201JKA 230 bp overlap
ChIP HepG2 ENCFF807KYJ 170 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 123 bp overlap
USF2 1 dataset
ChIP Hep-G2 GSE97661.USF2.Hep-G2 154 bp overlap
ZBTB6 1 dataset
ChIP HEK293 ENCFF881ECZ 59 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 149 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 123 bp overlap
ChIP K562 ENCFF361LXT 195 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 180 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 190 bp overlap
ZNF629 3 datasets
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 99 bp overlap
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 117 bp overlap
ChIP HepG2 ENCFF490FFQ 176 bp overlap
ZNF717 1 dataset
ChIP K562 ENCFF839EKA 170 bp overlap
ZNF770 2 datasets
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 84 bp overlap
ChIP HepG2 ENCFF233UVH 211 bp overlap