chr1 : 50,430,493 50,431,246
753 bp 96 TFs 2 linked genes
This 753 bp open chromatin element is linked to ENSG00000284700 and DMRTA2 and is bound by 96 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000284700 6.9 kb Proximal Proximity
DMRTA2 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:50,425,493 – 50,436,246
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 94 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 490 bp overlap
ChIP H1 ENCFF399KAM 666 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 714 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 648 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 753 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 219 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 528 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 345 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 576 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 226 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
ELK4 2 datasets
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
Motif ES_0h ES_0h-ELK4_MA0076.3 9 bp overlap
ERF::FOXI1 2 datasets
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
Motif ES_0h ES_0h-ERFFOXI1_MA1935.2 10 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 242 bp overlap
ETV1 3 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ChIP K562 ENCFF389WTI 278 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
EZH2 45 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 408 bp overlap
ChIP A673 ENCFF790MVL 462 bp overlap
ChIP A673 ENCFF955JRZ 72 bp overlap
ChIP A673 ENCFF955JRZ 462 bp overlap
ChIP A673 ENCFF955JRZ 246 bp overlap
ChIP GM12878 ENCFF635TDF 291 bp overlap
ChIP GM23248 ENCFF404ZHM 476 bp overlap
ChIP GM23338 ENCFF613YON 158 bp overlap
ChIP GM23338 ENCFF613YON 218 bp overlap
ChIP GM23338 ENCFF886DXX 299 bp overlap
ChIP H1 ENCFF232NZA 753 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 678 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 245 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 361 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 609 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 506 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 753 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 753 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 123 bp overlap
ChIP astrocyte ENCFF365JTP 319 bp overlap
ChIP astrocyte ENCFF365JTP 253 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 618 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 753 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 199 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 317 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 436 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 459 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 450 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 102 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 606 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 403 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 238 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 93 bp overlap
ChIP fibroblast of lung ENCFF479BAW 502 bp overlap
ChIP keratinocyte ENCFF070STK 402 bp overlap
ChIP keratinocyte ENCFF070STK 611 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 393 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 122 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 682 bp overlap
ChIP neural cell ENCFF610EPB 212 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 753 bp overlap
ChIP neural progenitor cell ENCFF018MKA 753 bp overlap
ChIP neural progenitor cell ENCFF472NFV 753 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif ES_0h ES_0h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXJ2::ELF1 2 datasets
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif ES_0h ES_0h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 525 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 252 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 179 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 336 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 535 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 421 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 447 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 603 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 531 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 573 bp overlap
ChIP foregut GSE117136.GATA6.foregut 374 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 312 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 276 bp overlap
ChIP WTC11 ENCFF255XXZ 264 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 280 bp overlap
HNRNPK 1 dataset
ChIP primary-keratinocyte GSE122327.HNRNPK.primary-keratinocyte 257 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 173 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 203 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
IKZF1 2 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JARID2 9 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 443 bp overlap
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 208 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 235 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 728 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 753 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 506 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 184 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 540 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 159 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 281 bp overlap
KDM1A 6 datasets
ChIP H1 ENCFF696SGD 356 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 218 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 193 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 312 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 299 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 208 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 513 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 396 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 165 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 281 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 531 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 753 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 129 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 728 bp overlap
NFIB 3 datasets
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
Motif DE_24h DE_24h-NFIB_MA1643.2 17 bp overlap
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NRF1 2 datasets
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 108 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 152 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 198 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 753 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 397 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 175 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 481 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 654 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 187 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 190 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Prdm4 3 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif DE_24h DE_24h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 248 bp overlap
RBM39 3 datasets
ChIP HepG2 ENCFF084YZE 681 bp overlap
ChIP HepG2 ENCFF084YZE 519 bp overlap
ChIP HepG2 ENCFF801JUH 677 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 520 bp overlap
ChIP H1 ENCFF239FFS 84 bp overlap
ChIP H1 ENCFF239FFS 720 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 198 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 753 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 182 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 550 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 449 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 637 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 208 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 107 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 475 bp overlap
SUZ12 10 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 753 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 753 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 443 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 753 bp overlap
ChIP NT2/D1 ENCFF574SXS 681 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 320 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 264 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 146 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 153 bp overlap
TFAP2B 3 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_24h DE_24h-TFAP2B_MA0811.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_24h DE_24h-TFAP2C_MA0524.3 11 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZBTB5 1 dataset
ChIP K-562 ENCSR389PWB.ZBTB5.K-562 206 bp overlap
ZBTB6 3 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_24h DE_24h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 221 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 201 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 155 bp overlap
ZFP36 3 datasets
ChIP Hep-G2 ENCSR382XLA.ZFP36.Hep-G2 110 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 269 bp overlap
ChIP K562 ENCFF255RZG 236 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 272 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF282 2 datasets
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
Motif ES_0h ES_0h-ZNF282_MA1154.2 15 bp overlap
ZNF418 3 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif DE_24h DE_24h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF454 3 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif DE_24h DE_24h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 300 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 437 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 451 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 388 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap