chr2 : 226,483,053 226,483,700
647 bp 82 TFs 0 linked genes
This 647 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:226,478,053 – 226,488,700
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 186 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 303 bp overlap
ChIP 12Z GSE129781.ARID1A.12Z 165 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 243 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 325 bp overlap
ATXN7L3 1 dataset
ChIP HCT-116_thaps GSE121798.ATXN7L3.HCT-116_thaps 254 bp overlap
BCL6 2 datasets
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
ChIP HepG2 ENCFF423EJH 377 bp overlap
BRD2 4 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 426 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 426 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 92 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 92 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 378 bp overlap
BRD4 10 datasets
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 442 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 429 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 363 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 230 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 176 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 230 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 310 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 253 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 503 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 414 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 433 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 272 bp overlap
CEBPA 5 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 204 bp overlap
ChIP HepG2 ENCFF175DFS 176 bp overlap
ChIP T-47D GSE132649.CEBPA.T-47D 299 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 441 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 249 bp overlap
CEBPB 17 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 285 bp overlap
ChIP A549 ENCFF235AIY 257 bp overlap
ChIP A549 ENCFF781RLJ 83 bp overlap
ChIP A549 ENCFF797MXZ 377 bp overlap
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 141 bp overlap
ChIP HCT116 ENCFF097OLY 417 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 647 bp overlap
ChIP Hep-G2 GSE123097.CEBPB.Hep-G2 165 bp overlap
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 137 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 107 bp overlap
ChIP HepG2 ENCFF536NTI 221 bp overlap
ChIP IMR-90 ENCFF468UGY 251 bp overlap
ChIP Ishikawa ENCFF010USJ 261 bp overlap
ChIP MCF-7 ENCFF772ZTQ 155 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 395 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 128 bp overlap
CEBPG 2 datasets
ChIP MCF-7 ENCFF155HZI 487 bp overlap
ChIP MCF-7 ENCSR094ZCF.CEBPG.MCF-7 230 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 276 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 365 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 529 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 316 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 531 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 276 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 472 bp overlap
EP300 5 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 287 bp overlap
ChIP A-549 ENCSR000BPW.EP300.A-549 76 bp overlap
ChIP MCF-7 ENCFF508OAU 311 bp overlap
ChIP MCF-7 ENCSR000BTR.EP300.MCF-7 183 bp overlap
ChIP T-47D ENCSR000BLM.EP300.T-47D 154 bp overlap
ESR1 5 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 269 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 307 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 189 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 253 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 229 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 219 bp overlap
FOXA1 12 datasets
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 246 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 169 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 222 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 215 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 333 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 320 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 472 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 397 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 452 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 154 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 229 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 214 bp overlap
FOXA2 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 563 bp overlap
FOXM1 1 dataset
ChIP MCF-7 ENCSR000BUJ.FOXM1.MCF-7 134 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 197 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 157 bp overlap
GATA3 5 datasets
ChIP MCF-7 ENCFF352QVM 396 bp overlap
ChIP MCF-7 ENCFF437NQS 106 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 299 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 274 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 296 bp overlap
GRHL2 1 dataset
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 349 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 163 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 164 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 214 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 147 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 618 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 182 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 370 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 410 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 281 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 344 bp overlap
NIPBL 1 dataset
ChIP MCF-7 GSE76893.NIPBL.MCF-7 156 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 322 bp overlap
NR3C1 7 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 275 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 176 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 204 bp overlap
ChIP HCC1937 GSE152203.NR3C1.HCC1937 247 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 239 bp overlap
ChIP MCF-7 GSE152203.NR3C1.MCF-7 154 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 254 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
PGR 4 datasets
ChIP T-47D_PG GSE68356.PGR.T-47D_PG 193 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 341 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 327 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 272 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 358 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 535 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 261 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 279 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE121355.RAD21.HCT-116 224 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 647 bp overlap
ChIP H1 ENCFF905HFL 58 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 300 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 205 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 201 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 230 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 150 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 239 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 245 bp overlap
SMARCA4 9 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 60 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 352 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 560 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 254 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 437 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 543 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 647 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 362 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 234 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 260 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 332 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 160 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 358 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 283 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 227 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 251 bp overlap
SP1 2 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 284 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 253 bp overlap
STAT3 1 dataset
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 218 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 108 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 440 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 337 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 302 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 155 bp overlap
YAP1 1 dataset
ChIP MCF-7 GSE107013.YAP1.MCF-7 129 bp overlap
YY1 2 datasets
ChIP A-549 ENCSR000BPM.YY1.A-549 228 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 191 bp overlap
YY1AP1 2 datasets
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 270 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 236 bp overlap
ZNF12 2 datasets
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 199 bp overlap
ChIP HepG2 ENCFF347LSW 331 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 276 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 233 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 155 bp overlap
ZXDC 1 dataset
ChIP MCF-7 GSE97661.ZXDC.MCF-7 262 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap