chr2 : 202,031,990 – 202,032,196
206 bp 87 TFs 3 linked genes
This 206 bp open chromatin element is linked to ENSG00000289026, ENSG00000273209, and FZD7 and is bound by 87 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289026 at TSS At TSS Proximity
ENSG00000273209 1.3 kb Proximal Proximity
FZD7 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:202,026,990 – 202,037,196
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 206 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 206 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 206 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 84 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 206 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 77 bp overlap
BRD4 3 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 150 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 106 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 64 bp overlap
CBX8 2 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 86 bp overlap
ChIP K562 ENCFF485TBL 74 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF998XEK 140 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 116 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 139 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 206 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 176 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 206 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 161 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 206 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 206 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 109 bp overlap
ETV2::DRGX 2 datasets
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
Motif ES_0h ES_0h-ETV2DRGX_MA1940.2 12 bp overlap
ETV5::DRGX 2 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::FOXO1 1 dataset
Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap
ETV5::HOXA2 2 datasets
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap
EWSR1-FLI1 1 dataset
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 2 datasets
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 143 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 123 bp overlap
Elf5 1 dataset
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 79 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 206 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
IRF3 1 dataset
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
IRF4 2 datasets
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
Motif ES_0h ES_0h-IRF4_MA1419.2 14 bp overlap
IRF5 1 dataset
Motif ES_0h ES_0h-IRF5_MA1420.1 14 bp overlap
IRF8 1 dataset
Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 177 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 206 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 206 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 177 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 89 bp overlap
KLF4 1 dataset
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 106 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 74 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 125 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 103 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 206 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 206 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 142 bp overlap
ChIP H1 ENCFF747ZPQ 206 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 206 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 159 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 206 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 206 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 99 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 142 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 84 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 62 bp overlap
NIPBL 2 datasets
ChIP WA09 GSE105028.NIPBL.WA09 206 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 206 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif ES_0h ES_0h-NR1D2_MA1532.2 15 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PHIP 5 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 89 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 126 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 79 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 126 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 73 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 206 bp overlap
ChIP H1 ENCFF770YBQ 206 bp overlap
ChIP H1 ENCFF833NJP 202 bp overlap
POU5F1 5 datasets
ChIP WA09 GSE105028.POU5F1.WA09 162 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 206 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 203 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 119 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 202 bp overlap
PRDM14 1 dataset
ChIP hESC GSE138674.PRDM14.hESC 100 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 201 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 163 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 202 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR138FUZ.RNF2.K-562 136 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 206 bp overlap
ChIP H1 ENCFF042ZSL 133 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 162 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 109 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 79 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 206 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 206 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 171 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 139 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 206 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 206 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 206 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 143 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 173 bp overlap
SMARCA4 7 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 55 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 206 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 206 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 111 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 206 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 206 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 206 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 206 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 132 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 206 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 206 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 206 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 206 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 162 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 103 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 53 bp overlap
ChIP WTC11 ENCFF688PEU 206 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 175 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 174 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 206 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 117 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 206 bp overlap
ChIP K-562 GSE55306.TBP.K-562 123 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 206 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 206 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 206 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 155 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 206 bp overlap
TFAP2C 3 datasets
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 98 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 137 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 127 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 206 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 187 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 124 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 110 bp overlap
ZNF263 2 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 173 bp overlap
ChIP K562 ENCFF281INV 206 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 139 bp overlap
ZNF398 1 dataset
ChIP H9 GSE133630.ZNF398.H9 134 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 206 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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