chr2 : 165,691,678 165,692,174
496 bp 104 TFs 0 linked genes
This 496 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:165,686,678 – 165,697,174
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
ATF6 1 dataset
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 328 bp overlap
CREB3L4 1 dataset
Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap
CTCF 85 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 214 bp overlap
ChIP AG04449 ENCFF248MBD 181 bp overlap
ChIP AG09309 ENCFF478XPS 214 bp overlap
ChIP AG09319 ENCFF401ZTN 233 bp overlap
ChIP AG10803 ENCFF549AQK 214 bp overlap
ChIP ASC GSE21366.CTCF.ASC 139 bp overlap
ChIP BJ ENCFF434HEC 180 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 192 bp overlap
ChIP GM23338 ENCFF531QOI 181 bp overlap
ChIP GM23338 ENCFF772DML 172 bp overlap
ChIP H1 ENCFF230QSV 159 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 132 bp overlap
ChIP H54 ENCFF255TVO 148 bp overlap
ChIP H9 ENCFF152GTF 247 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 255 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 196 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 174 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 196 bp overlap
ChIP HepG2 ENCFF348BUL 171 bp overlap
ChIP HepG2 ENCFF757EKU 271 bp overlap
ChIP IMR-90 ENCFF887MRH 219 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 148 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 113 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP MCF-7 ENCFF424NQR 185 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 236 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 126 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 216 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 148 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 258 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 157 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 229 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 144 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 182 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 242 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 214 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 254 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 217 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 246 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 185 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 256 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 318 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 225 bp overlap
ChIP chondrocyte ENCFF134ORZ 384 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 228 bp overlap
ChIP endodermal cell ENCFF471YCZ 328 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 224 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 244 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 210 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 111 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 131 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 162 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 154 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 143 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 186 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 140 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 101 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 206 bp overlap
ChIP heart left ventricle ENCFF548XHH 294 bp overlap
ChIP heart right ventricle ENCFF435TKW 318 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 126 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 164 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 202 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 206 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 218 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 206 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 157 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 234 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 238 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 353 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 144 bp overlap
ChIP myotube ENCFF981UHL 291 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 211 bp overlap
ChIP neural progenitor cell ENCFF420RBO 179 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 239 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 128 bp overlap
ChIP osteoblast ENCFF491ZJZ 317 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 232 bp overlap
ChIP osteocyte ENCFF929FPD 310 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 234 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 199 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 244 bp overlap
ChIP smooth muscle cell ENCFF656FBT 287 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
FLI1 2 datasets
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 198 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 250 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 130 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 3 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 250 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 284 bp overlap
GATA1 1 dataset
Motif DE_12h DE_12h-GATA1_MA0035.5 7 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 318 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 334 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 315 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 378 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 4 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP H1 ENCFF010YXS 282 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 169 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 185 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 277 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 65 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 271 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 329 bp overlap
ChIP WTC11 ENCFF166TKT 446 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 269 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 3 datasets
ChIP WA01 ERP004238.NANOG.WA01 186 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 189 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 266 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 248 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 28 datasets
ChIP H1 ENCFF698EWO 210 bp overlap
ChIP H1 ENCFF967OJF 183 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 342 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 345 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 399 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 127 bp overlap
ChIP HepG2 ENCFF906QIS 208 bp overlap
ChIP IMR-90 ENCFF752PTH 237 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 190 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 234 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 307 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 173 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 191 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 197 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 176 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 273 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 286 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 222 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 267 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 252 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 207 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 215 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 244 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 219 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 269 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 304 bp overlap
REST 6 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 293 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 172 bp overlap
ChIP neural ENCSR000BTV.REST.neural 177 bp overlap
ChIP neural cell ENCFF882LXX 292 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 115 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 119 bp overlap
SMARCA4 3 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 131 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 398 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 202 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 321 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 278 bp overlap
SMC3 3 datasets
ChIP IMR-90 ENCFF627LON 251 bp overlap
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 160 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 244 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 208 bp overlap
SP2 1 dataset
ChIP K-562 ENCSR000BNL.SP2.K-562 114 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 238 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 455 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 246 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 332 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 233 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 220 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 131 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF263 3 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ChIP HEK293 ENCFF336CWQ 337 bp overlap
ChIP WTC11 ENCFF893RTM 416 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 496 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 138 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCFF636WIC 278 bp overlap
ZNF701 3 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_24h DE_24h-ZNF708_MA1730.2 9 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap