chr2 : 145,194,856 145,195,097
241 bp 90 TFs 0 linked genes
This 241 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:145,189,856 – 145,200,097
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 176 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 99 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 195 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 208 bp overlap
BRD2 3 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 136 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 109 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 186 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 208 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 90 bp overlap
EP300 4 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 153 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 241 bp overlap
ChIP neural cell ENCFF442QNK 241 bp overlap
ChIP tibial nerve ENCFF346AYA 241 bp overlap
ESR1 6 datasets
ChIP MCF-7_IL1b-ICI GSE67295.ESR1.MCF-7_IL1b-ICI 113 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 131 bp overlap
ChIP T-47D GSE68355.ESR1.T-47D 173 bp overlap
ChIP T-47D_E2 GSE68356.ESR1.T-47D_E2 135 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 140 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 162 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 241 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 241 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 224 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 241 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 228 bp overlap
FOSL2 1 dataset
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 181 bp overlap
FOXA1 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 86 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 183 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 225 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 159 bp overlap
JUN 4 datasets
ChIP DE_D2 S54-DE-d2-JUN-exp2 187 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 200 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 241 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 241 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 107 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 203 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 241 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 241 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 180 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 241 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 241 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 217 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
NRF1 5 datasets
ChIP K-562 ENCSR998AJK.NRF1.K-562 232 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 133 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 123 bp overlap
ChIP K562 ENCFF689EWI 241 bp overlap
ChIP Namalwa GSE53133.NRF1.Namalwa 194 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 182 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 178 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 127 bp overlap
PKNOX1 3 datasets
ChIP HEK293T ENCFF174WDB 241 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 241 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 170 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 241 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 241 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 156 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 62 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 158 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 241 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 85 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 239 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 165 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 173 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 241 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 241 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 119 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 106 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 241 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 241 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 241 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 231 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 148 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 215 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 239 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 231 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 197 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 241 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 160 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 129 bp overlap
ChIP WTC11 ENCFF688PEU 241 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 114 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 203 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 231 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 131 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 223 bp overlap
ChIP H1 ENCFF778PAX 198 bp overlap
TP53 2 datasets
Motif DE_12h DE_12h-TP53_MA0106.3 18 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 203 bp overlap
TP63 1 dataset
Motif DE_12h DE_12h-TP63_MA0525.2 18 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 241 bp overlap
ChIP HEK293 ENCFF582MWI 241 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 59 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 241 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 105 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 103 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 157 bp overlap
ZBTB40 7 datasets
ChIP GM12878 ENCFF346DYM 241 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 134 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 241 bp overlap
ChIP K-562 ENCSR158RYZ.ZBTB40.K-562 232 bp overlap
ChIP K562 ENCFF337GJB 127 bp overlap
ChIP K562 ENCFF521DSV 241 bp overlap
ChIP K562 ENCFF952IUD 110 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 184 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 177 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 203 bp overlap
ZNF266 2 datasets
ChIP HEK293 ENCFF483FIW 115 bp overlap
ChIP HEK293 ENCSR466VYP.ZNF266.HEK293 100 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 132 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF44 1 dataset
ChIP HEK293T GSE78099.ZNF44.HEK293T 176 bp overlap
ZNF76 2 datasets
ChIP HEK293 ENCFF374TCG 241 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 206 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap