chr2 : 63,977,885 63,978,227
342 bp 73 TFs 0 linked genes
This 342 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:63,972,885 – 63,983,227
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 68 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 342 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 205 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 127 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 342 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 323 bp overlap
BATF 2 datasets
ChIP GM12878 ENCFF954REE 59 bp overlap
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 158 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 171 bp overlap
BCLAF1 1 dataset
ChIP GM12878 ENCFF306JRM 342 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 244 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 169 bp overlap
BRD4 16 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 342 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 342 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 342 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 180 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 243 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 184 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 342 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 341 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 209 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 311 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 342 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 323 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 342 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 124 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 342 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 102 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE83777.CDK7.Jurkat 260 bp overlap
CDK9 6 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 257 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 321 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 292 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 215 bp overlap
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 342 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 342 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 271 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 161 bp overlap
CREM 2 datasets
ChIP GM12878 ENCFF391UGE 280 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 280 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 342 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 264 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 342 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 258 bp overlap
ChIP LCL GSE75503.EBF1.LCL 91 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 128 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 282 bp overlap
EP300 2 datasets
ChIP GM12878 ENCFF039QRE 328 bp overlap
ChIP GM12878 ENCFF242HCG 328 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 240 bp overlap
ETV6 4 datasets
ChIP GM12878 ENCFF105ZMI 321 bp overlap
ChIP GM12878 ENCFF105ZMI 81 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 224 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 211 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 215 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 342 bp overlap
ChIP DE DE-FOXA2-2 342 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 322 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 181 bp overlap
GATA3 5 datasets
ChIP CD4_TH2 GSE72266.GATA3.CD4_TH2 337 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 342 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 216 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 225 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 212 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 342 bp overlap
ChIP DE DE-GATA4-2 342 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 342 bp overlap
ChIP DE DE-GATA6-2 342 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 342 bp overlap
ChIP GM12878 ENCFF824TGK 342 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 342 bp overlap
ChIP GM12878 ENCFF918AID 342 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 300 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 168 bp overlap
IRF1 1 dataset
ChIP HAEC_TNFa_4h GSE89970.IRF1.HAEC_TNFa_4h 131 bp overlap
IRF4 6 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 257 bp overlap
ChIP GM12878 ENCFF769ZDL 290 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 261 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 187 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 179 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 299 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 155 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 309 bp overlap
JUND 1 dataset
ChIP GM12878 ENCFF086GAB 275 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 296 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 199 bp overlap
MED1 5 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 272 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 218 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 276 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 342 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 342 bp overlap
MTA2 3 datasets
ChIP GM12878 ENCFF615CWQ 342 bp overlap
ChIP GM12878 ENCFF615CWQ 88 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 304 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCFF681QPL 342 bp overlap
MYB 5 datasets
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 311 bp overlap
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 272 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 342 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 342 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 332 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 143 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 342 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 213 bp overlap
NOTCH1 2 datasets
ChIP CUTLL1 GSE29600.NOTCH1.CUTLL1 201 bp overlap
ChIP HPBALL GSE39263.NOTCH1.HPBALL 342 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 289 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 309 bp overlap
NR3C1 2 datasets
ChIP NALM-6 GSE67046.NR3C1.NALM-6 342 bp overlap
ChIP NALM-6_CASP1 GSE67046.NR3C1.NALM-6_CASP1 342 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 146 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 147 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 342 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 242 bp overlap
RAD21 2 datasets
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 153 bp overlap
RBM22 4 datasets
ChIP HepG2 ENCFF292RVQ 342 bp overlap
ChIP HepG2 ENCFF292RVQ 225 bp overlap
ChIP HepG2 ENCFF561IAJ 342 bp overlap
ChIP HepG2 ENCFF561IAJ 225 bp overlap
RBPJ 3 datasets
ChIP CUTLL1 GSE29600.RBPJ.CUTLL1 161 bp overlap
ChIP LCL GSE75503.RBPJ.LCL 196 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 299 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 323 bp overlap
RUNX1 4 datasets
ChIP ALL-SIL GSE102209.RUNX1.ALL-SIL 137 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 342 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 342 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 342 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 342 bp overlap
RXRA 1 dataset
ChIP GM12878 ENCSR000BJD.RXRA.GM12878 123 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 299 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 213 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 233 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 226 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 342 bp overlap
SPI1 3 datasets
ChIP GM12878 ENCFF134LCP 205 bp overlap
ChIP GM12891 ENCFF563IUT 179 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 243 bp overlap
SPIB 2 datasets
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 158 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 231 bp overlap
SRF 2 datasets
ChIP GM12878 ENCFF878IIX 276 bp overlap
ChIP GM12878 ENCFF878IIX 252 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 85 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 101 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 342 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCFF951HUW 342 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 324 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 234 bp overlap
TCF12 3 datasets
ChIP GM12878 ENCFF433DMU 304 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 211 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 199 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 191 bp overlap
TCF7 3 datasets
ChIP GM12878 ENCFF749DPM 167 bp overlap
ChIP GM12878 ENCFF749DPM 341 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 158 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 87 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 57 bp overlap