chr2 : 36,965,312 – 36,965,609
297 bp 67 TFs 1 linked gene
This 297 bp open chromatin element is linked to STRN and is bound by 67 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
STRN 926 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:36,960,312 – 36,970,609
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 297 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 266 bp overlap
ARNT 1 dataset
ChIP K562 ENCFF451RAF 131 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 69 bp overlap
ATF4 3 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 297 bp overlap
ChIP K562 ENCFF030XBX 273 bp overlap
ChIP K562 ENCFF674KTF 174 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 297 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 262 bp overlap
BRD4 1 dataset
ChIP keratinocyte GSE140992.BRD4.keratinocyte 75 bp overlap
CCDC6 2 datasets
ChIP HepG2 ENCFF751JSA 297 bp overlap
ChIP HepG2 ENCFF751JSA 130 bp overlap
CEBPA 4 datasets
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 197 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 125 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 180 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 93 bp overlap
CEBPB 6 datasets
ChIP HeLa-S3 ENCFF722WEG 233 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 168 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 166 bp overlap
ChIP K562 ENCFF189VBN 238 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 149 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 173 bp overlap
CEBPG 2 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 235 bp overlap
ChIP K562 ENCFF783ADE 297 bp overlap
DDIT3 1 dataset
ChIP K562 ENCFF341NJI 297 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 197 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 193 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 297 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 83 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 235 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 184 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 243 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 237 bp overlap
ChIP DE DE-FOXA2-2 227 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 64 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 127 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 297 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 297 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 169 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 225 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 203 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 297 bp overlap
ChIP DE DE-GATA4-2 297 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 192 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 254 bp overlap
ChIP foregut GSE117136.GATA4.foregut 279 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 297 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 137 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 129 bp overlap
ChIP DE DE-GATA6-1 297 bp overlap
ChIP DE DE-GATA6-2 297 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 277 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 297 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 297 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 297 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 297 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 148 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 297 bp overlap
ChIP foregut GSE117136.GATA6.foregut 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 297 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 224 bp overlap
HDAC1 2 datasets
ChIP HepG2 ENCFF750ZWM 190 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 250 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 115 bp overlap
HDAC3 1 dataset
ChIP K562 ENCFF713GIR 297 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HOXA5 1 dataset
ChIP HepG2 ENCFF580MCT 289 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 230 bp overlap
KMT2A 3 datasets
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 297 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 107 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 51 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 142 bp overlap
MED1 3 datasets
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 297 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 233 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 77 bp overlap
MNT 2 datasets
ChIP K562 ENCFF342DNS 141 bp overlap
ChIP K562 ENCFF342DNS 297 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 297 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 250 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 297 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 159 bp overlap
ChIP hESC GSE18292.NANOG.hESC 116 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 124 bp overlap
NCOA6 1 dataset
ChIP K562 ENCFF471USR 282 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 172 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 80 bp overlap
PHIP 4 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 261 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 297 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 101 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 297 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 297 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 98 bp overlap
PPARG 1 dataset
ChIP HepG2 ENCFF329FBJ 104 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 297 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 294 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 90 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 297 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 214 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 297 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 297 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 221 bp overlap
SMARCC1 1 dataset
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 122 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 293 bp overlap
SOX18 1 dataset
ChIP HepG2 ENCFF348QIP 202 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 54 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 198 bp overlap
SRF 2 datasets
ChIP K-562 ENCSR582IAO.SRF.K-562 174 bp overlap
ChIP K562 ENCFF766EOO 297 bp overlap
TBX5 4 datasets
ChIP G296S GSE85628.TBX5.G296S 297 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 297 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 297 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 297 bp overlap
ZBTB10 1 dataset
ChIP HepG2 ENCFF916WXO 215 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 297 bp overlap
ZBTB43 1 dataset
ChIP HepG2 ENCFF487RQI 238 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 109 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 176 bp overlap
ZFP90 1 dataset
ChIP HepG2 ENCFF409XXV 284 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 297 bp overlap
ZNF316 1 dataset
ChIP K-562 ENCSR200JYP.ZNF316.K-562 221 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 297 bp overlap
ZNF592 3 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 269 bp overlap
ChIP K562 ENCFF547OSS 216 bp overlap
ChIP K562 ENCFF547OSS 297 bp overlap
ZNF598 1 dataset
ChIP HepG2 ENCFF356UIO 97 bp overlap
ZNF652 1 dataset
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 239 bp overlap
ZSCAN12 1 dataset
ChIP HepG2 ENCFF491QKS 170 bp overlap
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