chrX : 108,732,619 108,733,168
549 bp 102 TFs 2 linked genes
This 549 bp open chromatin element is linked to IRS4-AS1 and IRS4 and is bound by 102 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
IRS4-AS1 2.8 kb Proximal Proximity
IRS4 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:108,727,619 – 108,738,168
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 247 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 549 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 549 bp overlap
ASXL1 1 dataset
ChIP HEK293T GSE51673.ASXL1.HEK293T 96 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 321 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 221 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 549 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 549 bp overlap
BMI1 1 dataset
ChIP LNCaP-C4-2 GSE97831.BMI1.LNCaP-C4-2 319 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 240 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 406 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 274 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 447 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 211 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 256 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 237 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 310 bp overlap
ChIP BLaER1 ENCFF274GAT 512 bp overlap
ChIP BLaER1 ENCFF460KDD 350 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 445 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 414 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 549 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 194 bp overlap
EZH2 33 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 392 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 158 bp overlap
ChIP GM23248 ENCFF404ZHM 90 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 517 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 88 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 494 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 227 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 256 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 549 bp overlap
ChIP SK-N-MC ENCFF434OHW 496 bp overlap
ChIP SK-N-MC ENCFF674XUJ 496 bp overlap
ChIP SK-N-MC ENCFF674XUJ 481 bp overlap
ChIP T98G GSE112240.EZH2.T98G 280 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 549 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 316 bp overlap
ChIP astrocyte ENCFF365JTP 549 bp overlap
ChIP astrocyte ENCFF365JTP 549 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 549 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 180 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 266 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 179 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 549 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 549 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 549 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 549 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 408 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 206 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 549 bp overlap
ChIP hepatocyte ENCFF552DZB 549 bp overlap
ChIP hepatocyte ENCFF552DZB 544 bp overlap
ChIP keratinocyte ENCFF070STK 406 bp overlap
ChIP keratinocyte ENCFF070STK 499 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 549 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 243 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 503 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 54 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 254 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 310 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 366 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 321 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 224 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 441 bp overlap
HMGN3 1 dataset
ChIP K-562 ENCSR000DOB.HMGN3.K-562 203 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 341 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 530 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 484 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 403 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 304 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 286 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 332 bp overlap
KMT2A 3 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 544 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 325 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 382 bp overlap
MAFA 1 dataset
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MITF 1 dataset
ChIP 501-mel GSE137522.MITF.501-mel 191 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 392 bp overlap
MYCN 1 dataset
ChIP SHEP-21N_DOX_24H GSE80151.MYCN.SHEP-21N_DOX_24H 180 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 452 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 240 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 425 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 549 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 486 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 428 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 320 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 308 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 266 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 148 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 549 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 426 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 330 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 359 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 280 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 362 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 212 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 439 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 468 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 444 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
RNF2 4 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 549 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 226 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 215 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 549 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 275 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 460 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 460 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 274 bp overlap
SCRT1 4 datasets
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
ChIP HEK293 ENCFF513YVP 228 bp overlap
ChIP HEK293 ENCFF513YVP 321 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 539 bp overlap
SCRT2 2 datasets
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
ChIP HEK293 ENCFF711QQB 549 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 156 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 120 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 168 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 374 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 448 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 227 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 293 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 326 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 192 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 88 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 74 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 213 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 434 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 318 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 293 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 392 bp overlap
SS18 4 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 311 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 200 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 195 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 263 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 331 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 510 bp overlap
SUZ12 6 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 393 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 549 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 128 bp overlap
ChIP H1 ENCFF881NFR 549 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 529 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 549 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 178 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 206 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 254 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 125 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 549 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 549 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 239 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 99 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 445 bp overlap
ChIP HEK293 ENCFF865LIO 512 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 511 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 543 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 350 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 283 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 353 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 363 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 294 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 305 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 273 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 143 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 425 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 501 bp overlap
ZNF93 2 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap