chr2 : 20,445,280 20,445,662
382 bp 77 TFs 2 linked genes
This 382 bp open chromatin element is linked to ENSG00000290108 and RHOB and is bound by 77 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000290108 1.2 kb Proximal Proximity
RHOB 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:20,440,280 – 20,450,662
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 153 bp overlap
AR 2 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 94 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 192 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 234 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 175 bp overlap
BRD4 10 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 319 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 140 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 382 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 382 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 286 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 267 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 308 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 313 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 382 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 224 bp overlap
CCDC6 2 datasets
ChIP HepG2 ENCFF751JSA 159 bp overlap
ChIP HepG2 ENCFF751JSA 382 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 57 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 57 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF262VBH 309 bp overlap
ChIP BLaER1 ENCFF274GAT 300 bp overlap
ChIP BLaER1 ENCFF364PUR 250 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 362 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 198 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 113 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 382 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 382 bp overlap
GATA2 3 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 115 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 133 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 179 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 132 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 264 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 116 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 231 bp overlap
ChIP foregut GSE117136.GATA4.foregut 262 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 156 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 235 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 88 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 226 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 188 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 203 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 196 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 321 bp overlap
ChIP GM12878 ENCFF753XDO 382 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 294 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 283 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 168 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 216 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 58 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 52 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 291 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 231 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 112 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 71 bp overlap
MYCN 3 datasets
ChIP BE2C GSE80151.MYCN.BE2C 254 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 292 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 254 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 109 bp overlap
NAIF1 1 dataset
ChIP HepG2 ENCFF291NIS 109 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 364 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 87 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 71 bp overlap
NFYB 1 dataset
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 194 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 269 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 250 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 236 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 252 bp overlap
POLR2A 10 datasets
ChIP HepG2 ENCFF350RIU 382 bp overlap
ChIP HepG2 ENCFF350RIU 291 bp overlap
ChIP adrenal gland ENCFF843OBJ 382 bp overlap
ChIP endothelial cell of umbilical vein ENCFF091YHT 188 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 353 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 321 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 204 bp overlap
ChIP sigmoid colon ENCFF725QFT 348 bp overlap
ChIP sigmoid colon ENCFF748YVT 357 bp overlap
ChIP sigmoid colon ENCFF754JQR 359 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 117 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 382 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 382 bp overlap
PROX1 2 datasets
ChIP HepG2 ENCFF016ZJS 129 bp overlap
ChIP HepG2 ENCFF016ZJS 349 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 114 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 99 bp overlap
RELA 4 datasets
ChIP GM10847 ENCSR000DYM.RELA.GM10847 85 bp overlap
ChIP GM12878 ENCSR664POU.RELA.GM12878 219 bp overlap
ChIP GM12878 ENCSR000EAG.RELA.GM12878 136 bp overlap
ChIP GM19099 ENCSR000EBI.RELA.GM19099 81 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 101 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 89 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 199 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 69 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 166 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 324 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 262 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 382 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 285 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 152 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 300 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 152 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 298 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 219 bp overlap
ZBTB26 1 dataset
ChIP HepG2 ENCFF492SAJ 177 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 361 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 307 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 254 bp overlap
ZMAT3 1 dataset
ChIP HepG2 ENCFF053XGJ 102 bp overlap
ZNF121 1 dataset
ChIP HepG2 ENCFF343YSL 83 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 166 bp overlap
ZNF501 2 datasets
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 141 bp overlap
ChIP HepG2 ENCFF879XZR 262 bp overlap
ZNF564 1 dataset
ChIP HepG2 ENCFF364ZIM 219 bp overlap
ZNF615 2 datasets
ChIP HepG2 ENCFF440YLL 139 bp overlap
ChIP HepG2 ENCFF440YLL 373 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 112 bp overlap
ZSCAN30 1 dataset
ChIP HepG2 ENCFF093LBM 122 bp overlap