chr20 : 9,508,721 9,509,144
423 bp 60 TFs 2 linked genes
This 423 bp open chromatin element is linked to LAMP5 and LAMP5-AS1 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LAMP5 5.4 kb Proximal Proximity
LAMP5-AS1 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:9,503,721 – 9,514,144
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 160 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 423 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 366 bp overlap
BRD2 5 datasets
ChIP MV4-11_DMSO GSE120715.BRD2.MV4-11_DMSO 106 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 121 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 204 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 366 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD2.THP-1_iBET-BD2-PMA 423 bp overlap
BRD3 5 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 423 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 252 bp overlap
ChIP THP-1_iBET GSE138084.BRD3.THP-1_iBET 390 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD3.THP-1_iBET-BD1 371 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD3.THP-1_iBET-BD2-PMA 214 bp overlap
BRD4 9 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 292 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 379 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 116 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 423 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 423 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 164 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 356 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 241 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 215 bp overlap
CDK8 1 dataset
ChIP MV4-11 GSE65138.CDK8.MV4-11 224 bp overlap
CEBPA 2 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 137 bp overlap
ChIP SKH1_E2 GSE102697.CEBPA.SKH1_E2 165 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 92 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 390 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 172 bp overlap
CREB1 1 dataset
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 191 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 140 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 423 bp overlap
ERG 1 dataset
ChIP SEM GSE117864.ERG.SEM 361 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 146 bp overlap
EZH2 20 datasets
ChIP GM23338 ENCFF613YON 423 bp overlap
ChIP H1 ENCFF232NZA 423 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 360 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 423 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 423 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 414 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 281 bp overlap
ChIP astrocyte ENCFF365JTP 225 bp overlap
ChIP astrocyte ENCFF365JTP 238 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 217 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 146 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 241 bp overlap
ChIP fibroblast of lung ENCFF479BAW 423 bp overlap
ChIP fibroblast of lung ENCFF479BAW 320 bp overlap
ChIP hESC GSE113817.EZH2.hESC 255 bp overlap
ChIP hepatocyte ENCFF552DZB 291 bp overlap
ChIP hepatocyte ENCFF552DZB 255 bp overlap
ChIP neural progenitor cell ENCFF018MKA 423 bp overlap
ChIP neural progenitor cell ENCFF472NFV 423 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 211 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 241 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 352 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 176 bp overlap
HNRNPLL 4 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 305 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 298 bp overlap
ChIP HepG2 ENCFF355PIC 423 bp overlap
ChIP HepG2 ENCFF952XAB 423 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
KAT7 1 dataset
ChIP MOLM-13 GSE133516.KAT7.MOLM-13 327 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 82 bp overlap
ChIP H1 ENCFF078LED 305 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 423 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 180 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 331 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 64 bp overlap
MED1 1 dataset
ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 125 bp overlap
MEN1 2 datasets
ChIP MOLM-13_EPZ5676 GSE149183.MEN1.MOLM-13_EPZ5676 423 bp overlap
ChIP SEM GSE83671.MEN1.SEM 92 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 139 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 337 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 253 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 101 bp overlap
OGG1 1 dataset
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 254 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 356 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 224 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 423 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 242 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 209 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 423 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 157 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 423 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 141 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 79 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 230 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 264 bp overlap
SUZ12 6 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 341 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 423 bp overlap
ChIP NT2/D1 ENCFF574SXS 150 bp overlap
ChIP NT2/D1 ENCFF574SXS 423 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 344 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 170 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 170 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 250 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 175 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 389 bp overlap
YY1 1 dataset
ChIP WA01 GSE39096.YY1.WA01 150 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 401 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 124 bp overlap