chr18 : 63,616,861 63,617,523
662 bp 107 TFs 0 linked genes
This 662 bp open chromatin element has no linked target genes and is bound by 107 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:63,611,861 – 63,622,523
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
107 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 57 bp overlap
ASCL1 5 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 255 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 202 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 447 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 56 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 552 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 662 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 66 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 478 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 376 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 662 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 653 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 74 bp overlap
CHD4 1 dataset
ChIP HaCaT GSE139685.CHD4.HaCaT 70 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
EP300 1 dataset
ChIP sigmoid colon ENCFF524QSR 271 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA1 8 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 200 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 286 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
Motif DE_48h DE_48h-FOXA1_MA0148.5 8 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 152 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 276 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 178 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 512 bp overlap
FOXA2 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 63 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 436 bp overlap
ChIP DE DE-FOXA2-1 662 bp overlap
ChIP DE DE-FOXA2-2 662 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif DE_48h DE_48h-FOXA2_MA0047.4 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 613 bp overlap
FOXA3 2 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
Motif DE_48h DE_48h-FOXA3_MA1683.2 7 bp overlap
FOXB1 2 datasets
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
FOXC1 3 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 3 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXD1 2 datasets
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
Motif DE_48h DE_48h-FOXD1_MA0031.2 7 bp overlap
FOXD2 3 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 197 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXG1 2 datasets
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
FOXI1 2 datasets
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
Motif DE_48h DE_48h-FOXI1_MA0042.2 7 bp overlap
FOXK1 3 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif DE_48h DE_48h-FOXK1_MA0852.3 7 bp overlap
FOXK2 3 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif DE_48h DE_48h-FOXK2_MA1103.3 7 bp overlap
FOXL1 3 datasets
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif DE_48h DE_48h-FOXL1_MA0033.2 7 bp overlap
FOXN3 2 datasets
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
FOXO4 3 datasets
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif DE_48h DE_48h-FOXO4_MA0848.1 7 bp overlap
FOXO6 3 datasets
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap
FOXP1 3 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
Motif DE_48h DE_48h-FOXP1_MA0481.4 7 bp overlap
ChIP U2932 ERP010999.FOXP1.U2932 225 bp overlap
FOXP2 3 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
FOXP3 3 datasets
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif DE_48h DE_48h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
Motif DE_48h DE_48h-FOXP4_MA2117.1 7 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif DE_48h DE_48h-FOXS1_MA2118.1 8 bp overlap
Foxf1 3 datasets
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif DE_48h DE_48h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Motif DE_48h DE_48h-Foxj2_MA0614.1 8 bp overlap
Foxl2 3 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Foxo1 3 datasets
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif DE_48h DE_48h-Foxo1_MA0480.3 7 bp overlap
Foxo3 3 datasets
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif DE_48h DE_48h-Foxo3_MA0157.4 7 bp overlap
Foxq1 3 datasets
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 232 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 139 bp overlap
ChIP DE DE-GATA4-1 583 bp overlap
ChIP DE DE-GATA4-2 662 bp overlap
ChIP foregut GSE117136.GATA4.foregut 297 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 480 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 624 bp overlap
GATA6 10 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 203 bp overlap
ChIP DE DE-GATA6-1 563 bp overlap
ChIP DE DE-GATA6-2 638 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 662 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 648 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 662 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 662 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 662 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 532 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 525 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 286 bp overlap
HSF1 1 dataset
ChIP BPE_HEAT GSE38901.HSF1.BPE_HEAT 94 bp overlap
Hnf1A 3 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 62 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 450 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 351 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 303 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 458 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 314 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 191 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 256 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 94 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 50 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 219 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 88 bp overlap
MYOD1 3 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 350 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 352 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 408 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 478 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 228 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 91 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 178 bp overlap
NOTCH1 1 dataset
ChIP THP-6_shCtrl GSE138516.NOTCH1.THP-6_shCtrl 408 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 268 bp overlap
PBX3 2 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
PDX1 4 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 369 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 291 bp overlap
ChIP islet ERP001456.PDX1.islet 161 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 302 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 7 datasets
ChIP sigmoid colon ENCFF101ILL 321 bp overlap
ChIP sigmoid colon ENCFF725QFT 389 bp overlap
ChIP sigmoid colon ENCFF748YVT 269 bp overlap
ChIP sigmoid colon ENCFF748YVT 178 bp overlap
ChIP sigmoid colon ENCFF754JQR 365 bp overlap
ChIP transverse colon ENCFF607LKE 371 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
POU5F1 3 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 270 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 252 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 75 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 549 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 662 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 662 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 662 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 662 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 510 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 230 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 201 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 579 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 662 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 292 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 53 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 635 bp overlap
SPI1 2 datasets
ChIP EM-3 GSE128834.SPI1.EM-3 65 bp overlap
ChIP GM12891 ENCFF563IUT 62 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 80 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 166 bp overlap
TCF4 5 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 209 bp overlap
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 243 bp overlap
TCF7L1 3 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 220 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 160 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 160 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 220 bp overlap
ZBTB17 1 dataset
Motif DE_12h DE_12h-ZBTB17_MA2102.1 8 bp overlap
ZBTB18 2 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_48h DE_48h-ZBTB18_MA0698.2 11 bp overlap
ZBTB26 2 datasets
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_48h DE_48h-ZBTB26_MA1579.2 8 bp overlap
ZEB1 3 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 562 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 577 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap