chr17 : 65,902,943 65,903,221
278 bp 85 TFs 0 linked genes
This 278 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:65,897,943 – 65,908,221
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_1d GSE90550.AHR.MCF-7_TCDD_1d 144 bp overlap
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 170 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 223 bp overlap
ASCL1 3 datasets
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 113 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 121 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 251 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 241 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 278 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 266 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 250 bp overlap
BRD3 1 dataset
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 219 bp overlap
BRD4 4 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 206 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 278 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 238 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 278 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 125 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 278 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 104 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 278 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 278 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 265 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 154 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 187 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 278 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 143 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 278 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 177 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 241 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 97 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 278 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 124 bp overlap
EZH2 3 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 137 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 278 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 140 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 164 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 190 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 278 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 104 bp overlap
GATA6 9 datasets
ChIP AGS GSE51936.GATA6.AGS 164 bp overlap
ChIP DE DE-GATA6-2 278 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 204 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 278 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 278 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 278 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 278 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 223 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 278 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 147 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 204 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 278 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 223 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 242 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 278 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 278 bp overlap
JUND 3 datasets
ChIP Kasumi-1_RUNX1-KO GSE117105.JUND.Kasumi-1_RUNX1-KO 159 bp overlap
ChIP Kasumi-1_ctrl GSE117105.JUND.Kasumi-1_ctrl 179 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 149 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MED1 2 datasets
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 273 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 168 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 217 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 278 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 224 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 218 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 197 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 155 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 209 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 278 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 135 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 163 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 227 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POLR2A 2 datasets
ChIP body of pancreas ENCFF675RCN 278 bp overlap
ChIP neural cell ENCFF604SPB 135 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 224 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 180 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 258 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 266 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 208 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 158 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 278 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 224 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 99 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 278 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 278 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 278 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 278 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 278 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 278 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 278 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 278 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 207 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 193 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 157 bp overlap
SMARCA4 3 datasets
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 161 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 275 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 126 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 139 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 278 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 278 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 201 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 204 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 252 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 278 bp overlap
SOX2 8 datasets
ChIP H9 GSE46837.SOX2.H9 267 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 278 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 208 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 278 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 278 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 269 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 127 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 220 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 138 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
SS18 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 231 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 278 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 278 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 234 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 223 bp overlap
TCF12 3 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 214 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 248 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
ChIP NPC GSE154479.TCF3.NPC 278 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP hepatocellular-carcinoma-cell_420 GSE138781.TCF7L2.hepatocellular-carcinoma-cell_420 277 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 278 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 169 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 231 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP57 2 datasets
Motif DE_12h DE_12h-ZFP57_MA1583.2 7 bp overlap
ChIP hESC GSE115387.ZFP57.hESC 182 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 199 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 262 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap