chr17 : 36,941,980 36,942,525
545 bp 72 TFs 3 linked genes
This 545 bp open chromatin element is linked to LHX1, LHX1-DT, and AATF and is bound by 72 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
LHX1 5.2 kb Proximal Proximity
LHX1-DT 5.3 kb Proximal Proximity
AATF 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:36,936,980 – 36,947,525
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 255 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 301 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 452 bp overlap
ARNTL 1 dataset
ChIP GSC_387 GSE134972.ARNTL.GSC_387 147 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 484 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 131 bp overlap
BRD4 7 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 351 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 391 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 270 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 267 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 545 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 337 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 353 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 431 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 434 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 510 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 223 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF262VBH 251 bp overlap
ChIP BLaER1 ENCFF274GAT 68 bp overlap
ChIP BLaER1 ENCFF335XTP 383 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 85 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 262 bp overlap
ESR1 4 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 284 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 187 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 241 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 401 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 232 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 232 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 152 bp overlap
EZH2 24 datasets
ChIP A673 ENCFF790MVL 328 bp overlap
ChIP A673 ENCFF955JRZ 328 bp overlap
ChIP A673 ENCFF955JRZ 328 bp overlap
ChIP GM23248 ENCFF404ZHM 154 bp overlap
ChIP GM23248 ENCFF506FWX 445 bp overlap
ChIP GM23338 ENCFF613YON 545 bp overlap
ChIP GM23338 ENCFF886DXX 161 bp overlap
ChIP H1 ENCFF232NZA 545 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 135 bp overlap
ChIP astrocyte ENCFF365JTP 545 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 545 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 545 bp overlap
ChIP hESC GSE113817.EZH2.hESC 487 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 203 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 545 bp overlap
ChIP keratinocyte ENCFF070STK 520 bp overlap
ChIP keratinocyte ENCFF070STK 289 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 208 bp overlap
ChIP neural cell ENCFF610EPB 377 bp overlap
ChIP neural cell ENCFF610EPB 369 bp overlap
ChIP neural progenitor cell ENCFF018MKA 545 bp overlap
ChIP neural progenitor cell ENCFF472NFV 545 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 327 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 414 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 306 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 261 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 492 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 303 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 536 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 519 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 238 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 330 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 148 bp overlap
KAT7 2 datasets
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 267 bp overlap
ChIP WTC11 ENCFF581TPB 423 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 84 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 317 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 520 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 545 bp overlap
KMT2A 1 dataset
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 293 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 526 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 531 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 445 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 509 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 297 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 395 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 545 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 193 bp overlap
NOTCH1 1 dataset
ChIP HCC1599 GSE116871.NOTCH1.HCC1599 186 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 377 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 261 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 348 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 535 bp overlap
PCBP1 2 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 178 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 178 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 508 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 513 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 545 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 545 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 545 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 356 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 545 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 147 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 118 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 290 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 536 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 539 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 236 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 330 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 466 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 347 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 545 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 294 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 518 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 278 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 521 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 276 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 538 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 380 bp overlap
SMAD4 1 dataset
ChIP WTC11 ENCFF195KVB 371 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 482 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 307 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 436 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 105 bp overlap
ChIP WTC11 ENCFF688PEU 479 bp overlap
ChIP WTC11 ENCFF688PEU 350 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 464 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 545 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 201 bp overlap
SUZ12 7 datasets
ChIP GM12878 ENCFF498QAM 371 bp overlap
ChIP H1 ENCFF881NFR 545 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 299 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 368 bp overlap
ChIP NT2/D1 ENCFF574SXS 207 bp overlap
ChIP NT2/D1 ENCFF574SXS 329 bp overlap
ChIP NT2/D1 ENCFF574SXS 452 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 375 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 325 bp overlap
TARDBP 2 datasets
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 174 bp overlap
ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 159 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 118 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 73 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 338 bp overlap
TGIF2 2 datasets
ChIP WTC11 ENCFF649SHI 321 bp overlap
ChIP WTC11 ENCFF649SHI 441 bp overlap
TP53 1 dataset
ChIP lymphocyte_90 GSE110368.TP53.lymphocyte_90 295 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 428 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 417 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 480 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 444 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 344 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 163 bp overlap