chr16 : 74,866,003 74,866,478
475 bp 95 TFs 5 linked genes
This 475 bp open chromatin element is linked to 5 target genes and is bound by 95 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
WDR59 118.9 kb Distal Multiome
ZNRF1 132.8 kb Distal Multiome
RFWD3 199.3 kb Distal Multiome
GLG1 259.1 kb Distal Multiome
ZFP1 282.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:74,861,003 – 74,871,478
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 305 bp overlap
ARNT2 1 dataset
Motif DE_12h DE_12h-ARNT2_MA1464.2 8 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 300 bp overlap
Arnt 1 dataset
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_12h DE_12h-Arntl_MA0603.2 8 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 348 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 268 bp overlap
BHLHE40 2 datasets
Motif DE_12h DE_12h-BHLHE40_MA0464.3 8 bp overlap
ChIP Hep-G2 ENCSR000EDT.BHLHE40.Hep-G2 164 bp overlap
BRD4 2 datasets
ChIP hESC GSE33281.BRD4.hESC 62 bp overlap
ChIP hESC GSE33281.BRD4.hESC 107 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 428 bp overlap
CLOCK 2 datasets
Motif DE_12h DE_12h-CLOCK_MA0819.3 7 bp overlap
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 233 bp overlap
ETS1 3 datasets
ChIP GM23338 ENCFF701IZH 190 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 210 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 304 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 317 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 128 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 184 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 245 bp overlap
FOXA2 1 dataset
ChIP HepG2 ENCFF533COJ 297 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 337 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 254 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 63 bp overlap
HNRNPK 5 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 302 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 245 bp overlap
ChIP HepG2 ENCFF493GNS 345 bp overlap
ChIP HepG2 ENCFF826MXP 339 bp overlap
ChIP K562 ENCFF954RNO 187 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
IRF1 1 dataset
ChIP HAEC_TNFa_4h GSE89970.IRF1.HAEC_TNFa_4h 131 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 218 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 268 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 311 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 311 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 227 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 244 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 190 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 314 bp overlap
MAX 6 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 132 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 219 bp overlap
ChIP WTC11 ENCFF223QFY 475 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 210 bp overlap
MLX 1 dataset
Motif DE_12h DE_12h-MLX_MA0663.1 10 bp overlap
MLXIPL 1 dataset
Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 76 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 136 bp overlap
MZF1 1 dataset
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
Mlxip 1 dataset
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 388 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 335 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 346 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 220 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 186 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 192 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 252 bp overlap
ChIP islet ERP001456.PDX1.islet 113 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 253 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 294 bp overlap
ChIP H1 ENCFF566JSR 475 bp overlap
ChIP H1 ENCFF833NJP 322 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 126 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU5F1 10 datasets
ChIP BG03 GSE21614.POU5F1.BG03 206 bp overlap
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 156 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 358 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 450 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 326 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 201 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 328 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 338 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 207 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 362 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
SFPQ 1 dataset
ChIP HepG2 ENCFF145CDF 338 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 119 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 286 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 282 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 311 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 229 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 66 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 125 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 214 bp overlap
SMARCA4 4 datasets
ChIP BT-16_NoDox GSE71504.SMARCA4.BT-16_NoDox 180 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 276 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 201 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 345 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 210 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 261 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 242 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 139 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 283 bp overlap
ChIP hESC GSE69479.SOX2.hESC 208 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 358 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 154 bp overlap
ChIP WTC11 ENCFF688PEU 165 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 172 bp overlap
SRF 4 datasets
Motif DE_12h DE_12h-SRF_MA0083.3 16 bp overlap
ChIP H1 ENCFF036PEF 217 bp overlap
ChIP Hep-G2 ENCSR000BLV.SRF.Hep-G2 145 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 134 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TBP 6 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
ChIP hESC GSE122298.TBP.hESC 164 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 203 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 170 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 154 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 239 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 246 bp overlap
TEAD4 1 dataset
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 237 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 150 bp overlap
TFEB 1 dataset
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
TFEC 1 dataset
Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 249 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 218 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 117 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 286 bp overlap
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 2 datasets
ChIP Hep-G2 GSE97661.USF2.Hep-G2 158 bp overlap
ChIP WTC11 ENCFF139JAW 417 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 174 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 270 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 338 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 293 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap