chr14 : 60,506,456 – 60,507,348
892 bp 71 TFs 2 linked genes
This 892 bp open chromatin element is linked to SIX6 and ENSG00000258670 and is bound by 71 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SIX6 1.8 kb Proximal Proximity
ENSG00000258670 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:60,501,456 – 60,512,348
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 140 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 242 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 270 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 556 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 892 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 104 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 170 bp overlap
BCOR 5 datasets
ChIP WA01 GSE104690.BCOR.WA01 696 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 71 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 368 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 299 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 794 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 892 bp overlap
BRD4 4 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 227 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 222 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 277 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 344 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 207 bp overlap
CBX8 3 datasets
ChIP H1 ENCFF095JHA 61 bp overlap
ChIP H1 ENCFF095JHA 419 bp overlap
ChIP H1 ENCFF095JHA 577 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 529 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 411 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 585 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 892 bp overlap
CTCF 5 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 127 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 146 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 317 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 226 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 514 bp overlap
EZH2 35 datasets
ChIP A673 ENCFF790MVL 317 bp overlap
ChIP A673 ENCFF790MVL 91 bp overlap
ChIP A673 ENCFF955JRZ 317 bp overlap
ChIP A673 ENCFF955JRZ 91 bp overlap
ChIP GM23248 ENCFF404ZHM 414 bp overlap
ChIP GM23248 ENCFF404ZHM 597 bp overlap
ChIP GM23338 ENCFF613YON 892 bp overlap
ChIP GM23338 ENCFF886DXX 489 bp overlap
ChIP H1 ENCFF232NZA 892 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 892 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 712 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 812 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 249 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 328 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 136 bp overlap
ChIP SK-N-SH ENCFF657FZK 431 bp overlap
ChIP T98G GSE112240.EZH2.T98G 346 bp overlap
ChIP astrocyte ENCFF365JTP 481 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 701 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 735 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 741 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 437 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 327 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 195 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP fibroblast of lung ENCFF479BAW 487 bp overlap
ChIP hESC GSE113817.EZH2.hESC 435 bp overlap
ChIP hepatocyte ENCFF552DZB 892 bp overlap
ChIP keratinocyte ENCFF070STK 262 bp overlap
ChIP keratinocyte ENCFF070STK 257 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 397 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 892 bp overlap
ChIP neural progenitor cell ENCFF472NFV 892 bp overlap
EZH2_phosphoT487 1 dataset
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 463 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 202 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 276 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 155 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 216 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 83 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 155 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 430 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 280 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 317 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HINFP 1 dataset
Motif ES_0h ES_0h-HINFP_MA0131.3 8 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 827 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 315 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 656 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 764 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 144 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 319 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
MYC 1 dataset
ChIP P493-6_24HR GSE125863.MYC.P493-6_24HR 298 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 640 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 186 bp overlap
OSR2 1 dataset
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PCGF2 2 datasets
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 546 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 162 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 669 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 189 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 400 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 879 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 553 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 274 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 420 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 123 bp overlap
ChIP LNCaP GSE119385.REST.LNCaP 481 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 892 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 539 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 198 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 205 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 646 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 232 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 284 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 297 bp overlap
SMAD3 1 dataset
ChIP hESC GSE29422.SMAD3.hESC 189 bp overlap
SMARCA4 2 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 802 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 173 bp overlap
SMARCC1 1 dataset
ChIP ESC S25-ESC-d0-BAF155-exp1 56 bp overlap
SP1 2 datasets
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 192 bp overlap
SP5 2 datasets
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 362 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 318 bp overlap
SUZ12 12 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 447 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 236 bp overlap
ChIP H1 ENCFF881NFR 892 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 179 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 76 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 85 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 391 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 391 bp overlap
ChIP NT2/D1 ENCFF574SXS 692 bp overlap
ChIP NT2/D1 ENCFF574SXS 194 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 815 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 236 bp overlap
TBX18 2 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TCF12 3 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 278 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 102 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 318 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 151 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZBTB33 1 dataset
Motif DE_12h DE_12h-ZBTB33_MA0527.2 10 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 749 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF75A 2 datasets
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 2 datasets
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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