chr13 : 110,379,947 110,380,267
320 bp 101 TFs 0 linked genes
This 320 bp open chromatin element has no linked target genes and is bound by 101 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:110,374,947 – 110,385,267
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 144 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 226 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 266 bp overlap
BRD2 9 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 124 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 222 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 297 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 297 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 222 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 196 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 196 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 169 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 103 bp overlap
BRD4 7 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 320 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 316 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 205 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 205 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 150 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 223 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 223 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 75 bp overlap
CDK8 3 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 74 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 141 bp overlap
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 73 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 222 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 198 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 320 bp overlap
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 225 bp overlap
CTCF 10 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 224 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 320 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 96 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 84 bp overlap
ChIP chondrocyte ENCFF134ORZ 320 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 192 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 142 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 188 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 194 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 296 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 236 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 177 bp overlap
ChIP BLaER1 ENCFF364PUR 252 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 144 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_13 GSE104399.ESR1.breast_tumor_Male_13 210 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 320 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 262 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 154 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 122 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 315 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 66 bp overlap
FOSL1 1 dataset
ChIP MNNG-HOS GSE74230.FOSL1.MNNG-HOS 268 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 170 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 131 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 228 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 128 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 119 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 209 bp overlap
FOXA2 6 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 203 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 113 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 320 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 74 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 153 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 142 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 183 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 215 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 217 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 204 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 255 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 121 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 184 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 305 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 320 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 240 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 317 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 131 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 156 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 320 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 264 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 101 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 320 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 318 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 320 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 320 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 320 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 320 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 320 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 158 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 252 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 215 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 88 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 214 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 135 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 91 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 193 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 302 bp overlap
ChIP H1 ENCFF747ZPQ 222 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 320 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 217 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 263 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 305 bp overlap
ChIP hESC GSE18292.NANOG.hESC 159 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 208 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 163 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 205 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
POLR2A 2 datasets
ChIP SK-N-MC ENCFF088IVG 320 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 320 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2AF1 1 dataset
ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 248 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 8 datasets
ChIP BG03 GSE21614.POU5F1.BG03 118 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 310 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 311 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 159 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 130 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 258 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 305 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 243 bp overlap
RELA 10 datasets
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 130 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 140 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 185 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 171 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 124 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 89 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 148 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 144 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 280 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 134 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 312 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 320 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 320 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 242 bp overlap
SMARCA4 10 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 61 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 159 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 99 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 176 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 57 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 269 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 136 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 320 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 320 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 295 bp overlap
SMARCB1 5 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 299 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 288 bp overlap
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 153 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 320 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 145 bp overlap
SMARCC1 3 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 211 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 234 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 275 bp overlap
SMC3 2 datasets
ChIP IMR-90 ENCFF627LON 251 bp overlap
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 170 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 301 bp overlap
ChIP hESC GSE18292.SOX2.hESC 153 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 320 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 147 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 127 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 136 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 235 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 230 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 273 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 231 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 259 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 182 bp overlap
TWIST1 2 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 208 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 151 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 145 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 87 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 77 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 113 bp overlap