chr13 : 84,025,679 84,026,138
459 bp 111 TFs 0 linked genes
This 459 bp open chromatin element has no linked target genes and is bound by 111 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:84,020,679 – 84,031,138
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 2 datasets
ChIP DND41 GSE54379.BRD4.DND41 239 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 196 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 199 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 459 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 459 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 207 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 264 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 353 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 459 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 112 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 271 bp overlap
FOXA1 10 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 206 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 137 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 224 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 248 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 158 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 164 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 150 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 245 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 376 bp overlap
ChIP DE DE-FOXA2-2 363 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 254 bp overlap
FOXA3 2 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
FOXB1 2 datasets
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXD1 2 datasets
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
Motif ES_0h ES_0h-FOXD1_MA0031.2 7 bp overlap
FOXD2 2 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
FOXG1 2 datasets
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap
FOXI1 2 datasets
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXK1 2 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap
FOXL2 5 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 290 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 245 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 223 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 248 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 270 bp overlap
FOXO4 2 datasets
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap
FOXP1 3 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
ChIP H9 GSE31006.FOXP1.H9 257 bp overlap
FOXP2 3 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap
ChIP SK-N-MC ENCFF865YOS 236 bp overlap
FOXP3 2 datasets
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap
FOXP4 3 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
ChIP WTC11 ENCFF708TAF 319 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxf1 2 datasets
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
Foxo1 2 datasets
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap
GLI3 1 dataset
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
GLIS1 1 dataset
Motif DE_12h DE_12h-GLIS1_MA0735.2 15 bp overlap
GLIS3 1 dataset
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Gli1 1 dataset
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 184 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 121 bp overlap
HSF1 2 datasets
ChIP MO91 GSE45852.HSF1.MO91 254 bp overlap
ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 175 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 304 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 243 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 189 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 212 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 316 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 285 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 141 bp overlap
KMT2A 2 datasets
ChIP L826 GSE83671.KMT2A.L826 344 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 225 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 248 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 183 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 229 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 199 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 459 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 311 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 158 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 459 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 420 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 337 bp overlap
ChIP hESC GSE20650.NANOG.hESC 267 bp overlap
ChIP hESC GSE18292.NANOG.hESC 189 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 197 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 183 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
POU2AF1 1 dataset
ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 259 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 3 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 233 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 13 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 334 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 304 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 397 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 131 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 166 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 113 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 325 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 217 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 187 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 199 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 220 bp overlap
SMARCA4 5 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 459 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 209 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 157 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 345 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 459 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 364 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 383 bp overlap
SMARCC1 3 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 105 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 339 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 394 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 318 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 249 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 3 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 130 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 94 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 229 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 247 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 128 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 297 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 283 bp overlap
TFAP4 2 datasets
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 254 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 309 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
ZBTB7B 1 dataset
Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 256 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif ES_0h ES_0h-ZNF341_MA1655.2 8 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 107 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap