chr1 : 218,525,212 218,525,790
578 bp 87 TFs 0 linked genes
This 578 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:218,520,212 – 218,530,790
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 197 bp overlap
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 157 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 204 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 372 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 453 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 467 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 452 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 227 bp overlap
CDK7 2 datasets
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 95 bp overlap
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 160 bp overlap
CEBPB 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 109 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 74 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 214 bp overlap
CTCF 7 datasets
ChIP ID00016 GSE76922.CTCF.ID00016 133 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP brain ENCFF163BBN 355 bp overlap
ChIP brain ENCFF163BBN 155 bp overlap
ChIP endodermal cell ENCFF471YCZ 222 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 321 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 218 bp overlap
DPRX 3 datasets
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
ELF3 4 datasets
ChIP PDAC GSE64557.ELF3.PDAC 91 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 235 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 234 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 260 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 258 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 86 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 120 bp overlap
ESR1 1 dataset
ChIP ZR751 ERP000783.ESR1.ZR751 192 bp overlap
FLI1 5 datasets
ChIP A-673 GSE99959.FLI1.A-673 104 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 144 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 66 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 164 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 273 bp overlap
FOXA1 35 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 164 bp overlap
Motif DE_36h DE_36h-FOXA1_MA0148.5 8 bp overlap
Motif DE_48h DE_48h-FOXA1_MA0148.5 8 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 192 bp overlap
ChIP MCF-7 GSE128445.FOXA1.MCF-7 230 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 266 bp overlap
ChIP MCF-7 GSE60270.FOXA1.MCF-7 162 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 219 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 163 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 181 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 134 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 149 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 184 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 246 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 195 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 271 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 254 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 130 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 153 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 208 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 231 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 279 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 270 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 172 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 137 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 264 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 255 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 226 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 288 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 285 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 296 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 277 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 163 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 198 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 209 bp overlap
FOXA2 7 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 266 bp overlap
ChIP DE DE-FOXA2-1 446 bp overlap
ChIP DE DE-FOXA2-2 454 bp overlap
Motif DE_36h DE_36h-FOXA2_MA0047.4 8 bp overlap
Motif DE_48h DE_48h-FOXA2_MA0047.4 8 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 151 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 218 bp overlap
FOXA3 2 datasets
Motif DE_36h DE_36h-FOXA3_MA1683.2 7 bp overlap
Motif DE_48h DE_48h-FOXA3_MA1683.2 7 bp overlap
FOXB1 2 datasets
Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXD1 2 datasets
Motif DE_36h DE_36h-FOXD1_MA0031.2 7 bp overlap
Motif DE_48h DE_48h-FOXD1_MA0031.2 7 bp overlap
FOXG1 2 datasets
Motif DE_36h DE_36h-FOXG1_MA0613.1 8 bp overlap
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXI1 2 datasets
Motif DE_36h DE_36h-FOXI1_MA0042.2 7 bp overlap
Motif DE_48h DE_48h-FOXI1_MA0042.2 7 bp overlap
FOXK1 2 datasets
Motif DE_36h DE_36h-FOXK1_MA0852.3 7 bp overlap
Motif DE_48h DE_48h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_36h DE_36h-FOXK2_MA1103.3 7 bp overlap
Motif DE_48h DE_48h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_36h DE_36h-FOXL1_MA0033.2 7 bp overlap
Motif DE_48h DE_48h-FOXL1_MA0033.2 7 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 203 bp overlap
FOXN3 2 datasets
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
FOXO4 2 datasets
Motif DE_36h DE_36h-FOXO4_MA0848.1 7 bp overlap
Motif DE_48h DE_48h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
Motif DE_36h DE_36h-FOXP1_MA0481.4 7 bp overlap
Motif DE_48h DE_48h-FOXP1_MA0481.4 7 bp overlap
FOXP2 2 datasets
Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
FOXP3 2 datasets
Motif DE_36h DE_36h-FOXP3_MA0850.1 7 bp overlap
Motif DE_48h DE_48h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_36h DE_36h-FOXP4_MA2117.1 7 bp overlap
Motif DE_48h DE_48h-FOXP4_MA2117.1 7 bp overlap
FOXS1 2 datasets
Motif DE_36h DE_36h-FOXS1_MA2118.1 8 bp overlap
Motif DE_48h DE_48h-FOXS1_MA2118.1 8 bp overlap
Foxf1 2 datasets
Motif DE_36h DE_36h-Foxf1_MA1606.2 7 bp overlap
Motif DE_48h DE_48h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_36h DE_36h-Foxj2_MA0614.1 8 bp overlap
Motif DE_48h DE_48h-Foxj2_MA0614.1 8 bp overlap
Foxl2 2 datasets
Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Foxo1 2 datasets
Motif DE_36h DE_36h-Foxo1_MA0480.3 7 bp overlap
Motif DE_48h DE_48h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_36h DE_36h-Foxo3_MA0157.4 7 bp overlap
Motif DE_48h DE_48h-Foxo3_MA0157.4 7 bp overlap
GATA3 5 datasets
ChIP MCF-7 ENCFF437NQS 299 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 218 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 166 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 192 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 165 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 373 bp overlap
ChIP DE DE-GATA4-2 519 bp overlap
ChIP foregut GSE117136.GATA4.foregut 293 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 358 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 276 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 354 bp overlap
ChIP DE DE-GATA6-2 516 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 225 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 320 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 337 bp overlap
ChIP foregut GSE117136.GATA6.foregut 312 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 316 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 317 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 367 bp overlap
HMBOX1 2 datasets
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_48h DE_48h-HMBOX1_MA0895.2 7 bp overlap
Hmga1 2 datasets
Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap
Motif DE_48h DE_48h-Hmga1_MA2124.1 8 bp overlap
Irf1 2 datasets
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 73 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 210 bp overlap
MEF2A 2 datasets
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
Motif DE_48h DE_48h-MEF2A_MA0052.5 10 bp overlap
MEF2B 2 datasets
Motif DE_36h DE_36h-MEF2B_MA0660.1 12 bp overlap
Motif DE_48h DE_48h-MEF2B_MA0660.1 12 bp overlap
MEF2D 2 datasets
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
Motif DE_48h DE_48h-MEF2D_MA0773.1 12 bp overlap
MITF 6 datasets
ChIP 501-mel GSE137522.MITF.501-mel 263 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 133 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 272 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 218 bp overlap
ChIP 501-mel_K243R GSE137522.MITF.501-mel_K243R 182 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 69 bp overlap
MSANTD3 3 datasets
Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_48h DE_48h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 71 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 368 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 332 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 301 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 173 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 382 bp overlap
NKX2-2 3 datasets
Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap
NR2F2 1 dataset
ChIP PBMC_reference_pooled GSE110756.NR2F2.PBMC_reference_pooled 71 bp overlap
NR3C1 3 datasets
ChIP HeLa-B2_GRKD_DMSO GSE24518.NR3C1.HeLa-B2_GRKD_DMSO 185 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 191 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 182 bp overlap
Nr2e3 3 datasets
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_48h DE_48h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
PKNOX1 2 datasets
ChIP MCF-7 ENCFF116OCS 270 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 184 bp overlap
POU5F1 2 datasets
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 109 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 284 bp overlap
RBPJ 3 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 578 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 358 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 323 bp overlap
SMARCA4 5 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 155 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 240 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 56 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 269 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 361 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 205 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 227 bp overlap
STAT1 1 dataset
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 73 bp overlap
STAT3 3 datasets
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 76 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 129 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 83 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 344 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 177 bp overlap
TP53 1 dataset
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 181 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 431 bp overlap
ZFX 1 dataset
ChIP MCF-7 ENCFF009NAJ 427 bp overlap
ZIM3 3 datasets
Motif DE_36h DE_36h-ZIM3_MA1709.2 11 bp overlap
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF143 3 datasets
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF257 2 datasets
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF354C 3 datasets
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 232 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 181 bp overlap
ZNF701 2 datasets
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZNF708 1 dataset
ChIP HEK293T GSE78099.ZNF708.HEK293T 238 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap