chr12 : 111,046,745 111,047,222
477 bp 92 TFs 0 linked genes
This 477 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:111,041,745 – 111,052,222
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 184 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 187 bp overlap
ARNT 1 dataset
ChIP RCC4 GSE85352.ARNT.RCC4 101 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
Ahr::Arnt 3 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 221 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 378 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 240 bp overlap
CTCF 2 datasets
ChIP GM23338 ENCFF772DML 152 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 243 bp overlap
CXXC4 1 dataset
ChIP HEK293T GSE42958.CXXC4.HEK293T 216 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 155 bp overlap
ChIP BLaER1 ENCFF262VBH 140 bp overlap
ChIP BLaER1 ENCFF274GAT 199 bp overlap
ChIP BLaER1 ENCFF364PUR 280 bp overlap
E2F3 2 datasets
Motif DE_12h DE_12h-E2F3_MA0469.4 14 bp overlap
Motif DE_24h DE_24h-E2F3_MA0469.4 14 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 131 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 157 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 331 bp overlap
ERG 4 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 116 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 191 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 171 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 209 bp overlap
ESR1 1 dataset
ChIP Ishikawa GSE99905.ESR1.Ishikawa 186 bp overlap
EZH2 1 dataset
ChIP T98G GSE112240.EZH2.T98G 234 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 204 bp overlap
FOSL2 1 dataset
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 270 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 477 bp overlap
ChIP DE DE-FOXA2-2 366 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 420 bp overlap
ChIP DE DE-GATA4-2 369 bp overlap
ChIP foregut GSE117136.GATA4.foregut 152 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 107 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 472 bp overlap
ChIP DE DE-GATA6-2 430 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 442 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 467 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 284 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 269 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 115 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 364 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 332 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 477 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 477 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 290 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 130 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 219 bp overlap
KLF1 1 dataset
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF2 1 dataset
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 261 bp overlap
KLF5 3 datasets
ChIP HEK293 GSE88976.KLF5.HEK293 363 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 309 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 244 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
KMT2A 5 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 282 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 280 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 333 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 477 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 134 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 346 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 244 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 261 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MEIS3 2 datasets
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
Motif DE_24h DE_24h-MEIS3_MA0775.2 7 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 138 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 384 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 255 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 259 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 281 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 269 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 233 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 147 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 231 bp overlap
ONECUT2 1 dataset
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 86 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 199 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 202 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 477 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 197 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 477 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif DE_24h DE_24h-Pax7_MA0680.3 10 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 169 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 176 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 205 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 129 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 163 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 446 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 433 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 477 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 477 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 477 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 477 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 450 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 471 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 280 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 335 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 239 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 175 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 164 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 159 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 218 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 176 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap
YY1 4 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 292 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 316 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 113 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 142 bp overlap
ZBTB17 2 datasets
Motif DE_12h DE_12h-ZBTB17_MA2102.1 8 bp overlap
Motif DE_24h DE_24h-ZBTB17_MA2102.1 8 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 333 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 271 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 428 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 477 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Zfp809 3 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap