chr1 : 204,304,190 – 204,304,358
168 bp 69 TFs 1 linked gene
This 168 bp open chromatin element is linked to PLEKHA6 and is bound by 69 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PLEKHA6 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:204,299,190 – 204,309,358
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 168 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 168 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 168 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 168 bp overlap
BRD2 14 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 168 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 168 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 168 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 168 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 168 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 168 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 168 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 103 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 103 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 168 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 168 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 168 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 168 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 168 bp overlap
BRD4 10 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 168 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 168 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 168 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 133 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 168 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 168 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 168 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 168 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 168 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 142 bp overlap
BRD9 4 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 168 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD9.MDA-MB-231_JQ1 168 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 168 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 168 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 168 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 168 bp overlap
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 168 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 168 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 168 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 168 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 168 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 168 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 157 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 161 bp overlap
ERG 7 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 168 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 168 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 126 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 132 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 168 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 168 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 132 bp overlap
ETS1 4 datasets
ChIP GM23338 ENCFF701IZH 168 bp overlap
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 137 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 168 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 166 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 168 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 168 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 168 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 159 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 168 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 94 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 168 bp overlap
GATA2 3 datasets
ChIP WA09 GSE105081.GATA2.WA09 113 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 168 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 168 bp overlap
GATA3 2 datasets
ChIP MCF-7 GSE133072.GATA3.MCF-7 168 bp overlap
ChIP WA09 GSE105081.GATA3.WA09 65 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 66 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 168 bp overlap
ChIP DE DE-GATA4-2 168 bp overlap
ChIP foregut GSE117136.GATA4.foregut 168 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 102 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 168 bp overlap
ChIP DE DE-GATA6-2 168 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 168 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 137 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 168 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 168 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 168 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 168 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 166 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 88 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 168 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 150 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 168 bp overlap
JUN 8 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 124 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 168 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 168 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 168 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 168 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 117 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 168 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 163 bp overlap
JUND 1 dataset
ChIP H1 ENCFF010YXS 168 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 117 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 123 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 154 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 168 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 168 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 168 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 168 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 168 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 168 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 162 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 168 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 168 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 135 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 165 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 168 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 141 bp overlap
POU5F1 7 datasets
ChIP GM23338 ENCFF333SNB 168 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 168 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 168 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 160 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 168 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 168 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 168 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 168 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 168 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 168 bp overlap
RELA 5 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 164 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 72 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 165 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 168 bp overlap
REST 3 datasets
ChIP GM23338 ENCSR871KYB.REST.GM23338 117 bp overlap
ChIP H1 ENCFF429RUE 168 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 137 bp overlap
RXRA 2 datasets
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 168 bp overlap
ChIP JMSU-1_RXRA-S427F GSE107734.RXRA.JMSU-1_RXRA-S427F 168 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 168 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 168 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 168 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 168 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 168 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 168 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 168 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 116 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 67 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 168 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 168 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 168 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 168 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 163 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 168 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 168 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 168 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 168 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 168 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 168 bp overlap
ChIP HCT116 ENCFF800LBN 168 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 168 bp overlap
SPI1 14 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 168 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 168 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 168 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 168 bp overlap
ChIP HL-60 ENCFF645GBT 168 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 168 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 155 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 108 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 135 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 146 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 164 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 129 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 168 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 168 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 168 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 143 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 144 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 90 bp overlap
TEAD1 3 datasets
ChIP H69 GSE62274.TEAD1.H69 127 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 168 bp overlap
ChIP WTC11 ENCFF502QUV 168 bp overlap
TEAD4 10 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 168 bp overlap
ChIP H1 ENCFF778PAX 168 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 168 bp overlap
ChIP MKN28 GSE44416.TEAD4.MKN28 168 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 168 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 168 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 168 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 127 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 168 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 168 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 164 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 168 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 123 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 119 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 118 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 122 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 168 bp overlap
YAP1 2 datasets
ChIP MCF-10A GSE97972.YAP1.MCF-10A 162 bp overlap
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 168 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 168 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 134 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 168 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 144 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 131 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 167 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 63 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 168 bp overlap
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