chr1 : 158,043,147 158,043,832
685 bp 86 TFs 0 linked genes
This 685 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:158,038,147 – 158,048,832
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 393 bp overlap
BRD2 3 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 313 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 165 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 146 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 314 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 295 bp overlap
BRD4 14 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 645 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 287 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 521 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 268 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 412 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 393 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 442 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 464 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 523 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 277 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 663 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 310 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 331 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 257 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 416 bp overlap
ChIP K562 ENCFF673OEZ 138 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 180 bp overlap
CHD4 2 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 236 bp overlap
ChIP 501-mel GSE134848.CHD4.501-mel 298 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 323 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 102 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 420 bp overlap
CTCF 37 datasets
ChIP COLO-829 GSE81945.CTCF.COLO-829 268 bp overlap
ChIP GM23338 ENCFF531QOI 418 bp overlap
ChIP H9 ENCFF152GTF 461 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 196 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 251 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 235 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 263 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 269 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 153 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 107 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 167 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 189 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 102 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 157 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 201 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 300 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 170 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 215 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 143 bp overlap
ChIP NPC GSE115407.CTCF.NPC 245 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 215 bp overlap
ChIP brain ENCFF163BBN 502 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 274 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 150 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 126 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 217 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 122 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 137 bp overlap
ChIP neural progenitor cell ENCFF420RBO 234 bp overlap
ChIP neural progenitor cell ENCFF581WPG 490 bp overlap
ChIP neural progenitor cell ENCFF581WPG 255 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 405 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 228 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 149 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 285 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 230 bp overlap
E2F3 1 dataset
ChIP K-562 ENCSR036QIR.E2F3.K-562 208 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 135 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 127 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
FOXA1 1 dataset
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 175 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 426 bp overlap
ChIP DE DE-FOXA2-2 502 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 90 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 261 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 172 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 177 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 269 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 272 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 317 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 255 bp overlap
ChIP K562 ENCFF513FTZ 301 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 276 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 259 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 466 bp overlap
ChIP DE DE-GATA4-2 685 bp overlap
ChIP foregut GSE117136.GATA4.foregut 491 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 417 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 424 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 418 bp overlap
ChIP DE DE-GATA6-2 447 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 405 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 319 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 266 bp overlap
ChIP foregut GSE117136.GATA6.foregut 522 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 347 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 394 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 303 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 257 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 170 bp overlap
HEXIM1 1 dataset
ChIP A-375_DMSO GSE68052.HEXIM1.A-375_DMSO 172 bp overlap
HNF4A 3 datasets
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA1494.2 14 bp overlap
ChIP hiPSC GSE104613.HNF4A.hiPSC 272 bp overlap
HNF4G 1 dataset
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 421 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 275 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 444 bp overlap
ChIP K562 ENCFF348IBL 272 bp overlap
ChIP K562 ENCFF771OHZ 497 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 187 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 321 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 197 bp overlap
KDM1A 6 datasets
ChIP H1 ENCFF696SGD 130 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 442 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 187 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 306 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 132 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 139 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 204 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 446 bp overlap
KLF4 1 dataset
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 141 bp overlap
MAZ 2 datasets
ChIP K-562 ENCSR163IUV.MAZ.K-562 274 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 108 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 264 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 319 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 209 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR910JAI.NCOR1.K-562 206 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 169 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 279 bp overlap
NR1I3 1 dataset
Motif DE_60h DE_60h-NR1I3_MA1534.2 8 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 176 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 283 bp overlap
ChIP K562 ENCFF236IUS 165 bp overlap
PRDM9 1 dataset
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 502 bp overlap
RB1 3 datasets
ChIP K-562 ENCSR670JDQ.RB1.K-562 402 bp overlap
ChIP K-562 ENCSR506CVF.RB1.K-562 119 bp overlap
ChIP K562 ENCFF627ZBG 341 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 141 bp overlap
RBM25 2 datasets
ChIP K562 ENCFF248CGR 66 bp overlap
ChIP K562 ENCFF957ORK 66 bp overlap
RBPJ 2 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 221 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SCRT1 3 datasets
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
ChIP HEK293 ENCFF513YVP 417 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 249 bp overlap
SCRT2 1 dataset
Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap
SMAD2 1 dataset
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 602 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 410 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 423 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 541 bp overlap
SMARCA4 6 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 129 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 357 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 263 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 596 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 224 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 309 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 260 bp overlap
SOX2 9 datasets
ChIP H9 GSE46837.SOX2.H9 186 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 483 bp overlap
ChIP NPC GSE122631.SOX2.NPC 288 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 213 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 135 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 284 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 245 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 212 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 317 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 376 bp overlap
SOX4 1 dataset
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 275 bp overlap
ChIP K562 ENCFF059YCJ 437 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
TAL1 9 datasets
ChIP CD34 GSE52924.TAL1.CD34 197 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 385 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 232 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 225 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 238 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 215 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 203 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 183 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 162 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 163 bp overlap
TFDP1 1 dataset
ChIP K-562 ENCSR224IKA.TFDP1.K-562 122 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 128 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 293 bp overlap
ZNF148 4 datasets
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 665 bp overlap
ChIP K-562 ENCSR018MSO.ZNF148.K-562 435 bp overlap
ChIP K562 ENCFF352SDL 301 bp overlap
ZNF213 1 dataset
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 361 bp overlap
ZNF281 3 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ChIP K-562 GSE121133.ZNF281.K-562 204 bp overlap
ChIP K562 ENCFF594VNM 320 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap