chr1:156,432,112–156,432,986

chr1 : 156,432,112 – 156,432,986

874 bp 50 TFs 14 linked genes

This 874 bp open chromatin element is linked to 14 target genes and is bound by 50 transcription factors.

Linked Genes

14 genes

Gene	Expression	Dist. to TSS	Distance	Link type
MIR9-1HG		2.7 kb	Proximal	Proximity
MEF2D		68.2 kb	Distal	Multiome
CCT3		94.3 kb	Distal	Multiome
GLMP		137.0 kb	Distal	Multiome
IQGAP3		139.9 kb	Distal	Multiome
SMG5		149.8 kb	Distal	Multiome
NAXE		159.1 kb	Distal	Multiome
GPATCH4		168.8 kb	Distal	Multiome
PMF1		219.6 kb	Distal	Multiome
SLC25A44		238.5 kb	Distal	Multiome
NES		244.8 kb	Distal	Multiome
CRABP2		273.2 kb	Distal	Multiome
ISG20L2		295.8 kb	Distal	Multiome
METTL25B		295.8 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

ARID4B 1 dataset

ChIP PC-3 GSE116669.ARID4B.PC-3 263 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 261 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 152 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 638 bp overlap

ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 236 bp overlap

BRD4 3 datasets

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 68 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 156 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 202 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 394 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 92 bp overlap

ChIP BLaER1 ENCFF262VBH 251 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 448 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 219 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 326 bp overlap

ETS1 4 datasets

ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 170 bp overlap

ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 169 bp overlap

ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 170 bp overlap

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 228 bp overlap

EZH2 37 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 644 bp overlap

ChIP DND-41 ENCFF187XWF 333 bp overlap

ChIP DND41 ENCSR000ASW.EZH2.DND41 108 bp overlap

ChIP GM23248 ENCFF404ZHM 383 bp overlap

ChIP GM23248 ENCFF404ZHM 93 bp overlap

ChIP GM23338 ENCFF613YON 208 bp overlap

ChIP GM23338 ENCFF613YON 112 bp overlap

ChIP H1 ENCFF232NZA 579 bp overlap

ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 291 bp overlap

ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 318 bp overlap

ChIP HeLa-S3 ENCFF318LHU 281 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 550 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 161 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 653 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 78 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 117 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 711 bp overlap

ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 73 bp overlap

ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 449 bp overlap

ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 504 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 143 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 628 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 873 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 640 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 231 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 121 bp overlap

ChIP fibroblast of dermis ENCFF029VZK 181 bp overlap

ChIP fibroblast of lung ENCFF479BAW 369 bp overlap

ChIP fibroblast of lung ENCFF479BAW 168 bp overlap

ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 162 bp overlap

ChIP keratinocyte ENCFF070STK 412 bp overlap

ChIP keratinocyte ENCFF070STK 176 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 520 bp overlap

ChIP neural progenitor cell ENCFF018MKA 577 bp overlap

ChIP neural progenitor cell ENCFF472NFV 687 bp overlap

ChIP skeletal muscle myoblast ENCFF338LNF 394 bp overlap

ChIP skeletal muscle myoblast ENCFF338LNF 169 bp overlap

EZH2_phosphoT487 4 datasets

ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 58 bp overlap

ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 111 bp overlap

ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 300 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 170 bp overlap

FOXA1 2 datasets

ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 130 bp overlap

ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 248 bp overlap

GATA3 1 dataset

ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 115 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-1 54 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-2 261 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 66 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 163 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 542 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 717 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 533 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 158 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 196 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 618 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 160 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 272 bp overlap

HDAC2 1 dataset

ChIP K-562 ENCSR075HTM.HDAC2.K-562 292 bp overlap

HNRNPH1 1 dataset

ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 152 bp overlap

JARID2 6 datasets

ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 527 bp overlap

ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 874 bp overlap

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 490 bp overlap

ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 393 bp overlap

ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 591 bp overlap

ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 164 bp overlap

ChIP 786-O GSE86092.JUN.786-O 256 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 565 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 204 bp overlap

ChIP endothelial cell of umbilical vein ENCFF100YIN 241 bp overlap

ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 125 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 251 bp overlap

ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 275 bp overlap

MYCN 2 datasets

ChIP BE2C GSE80151.MYCN.BE2C 179 bp overlap

ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 179 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 440 bp overlap

NEUROD1 3 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 125 bp overlap

ChIP D283-Med GSE92582.NEUROD1.D283-Med 286 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 195 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 284 bp overlap

PCGF2 1 dataset

ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 412 bp overlap

POU2F1 1 dataset

ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 76 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 70 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 298 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 485 bp overlap

PRDM14 1 dataset

ChIP hESC GSE22767.PRDM14.hESC 335 bp overlap

PRDM15 1 dataset

ChIP WTC11 ENCFF108TMF 401 bp overlap

RBPJ 3 datasets

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 93 bp overlap

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 337 bp overlap

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 364 bp overlap

RNF2 5 datasets

ChIP H1 ENCFF239FFS 694 bp overlap

ChIP H1 ENCFF239FFS 469 bp overlap

ChIP HUES-64 GSE104059.RNF2.HUES-64 99 bp overlap

ChIP WA01 ENCSR784VUY.RNF2.WA01 179 bp overlap

ChIP WA01 ENCSR784VUY.RNF2.WA01 584 bp overlap

ChIP WA01 GSE104690.RYBP.WA01 322 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 572 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 145 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 413 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 129 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 464 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 75 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 283 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 150 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 183 bp overlap

SMARCA4 2 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 115 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 75 bp overlap

SMARCC1 1 dataset

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 277 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 311 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 214 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 190 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 407 bp overlap

SUZ12 7 datasets

ChIP Aska-SS GSE108025.SUZ12.Aska-SS 101 bp overlap

ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 334 bp overlap

ChIP H1 ENCFF881NFR 330 bp overlap

ChIP H1 ENCFF881NFR 614 bp overlap

ChIP NCCIT GSE71675.SUZ12.NCCIT 560 bp overlap

ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 259 bp overlap

ChIP WA01 ENCSR000EUQ.SUZ12.WA01 234 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap

TFDP1 1 dataset

ChIP K562 ENCFF584VSB 540 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 266 bp overlap

USF2 2 datasets

ChIP H1 ENCFF434EDF 277 bp overlap

ChIP WTC11 ENCFF139JAW 417 bp overlap

ChIP HEK293T_22Rv1 GSE145160.ZFY.HEK293T_22Rv1 428 bp overlap