chr7 : 31,466,056 31,466,414
358 bp 89 TFs 0 linked genes
This 358 bp open chromatin element has no linked target genes and is bound by 89 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:31,461,056 – 31,471,414
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 358 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 358 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 200 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 358 bp overlap
ChIP H1 ENCFF295GZO 259 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 277 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 326 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 136 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 358 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 212 bp overlap
BRD4 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 327 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 252 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 189 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 331 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 141 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 233 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 340 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 254 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 279 bp overlap
ChIP H1 ENCFF955PMP 260 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 197 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 358 bp overlap
CTCF 3 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 310 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 104 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 358 bp overlap
DMRT3 1 dataset
Motif ES_0h ES_0h-DMRT3_MA0610.2 7 bp overlap
DMRTA1 1 dataset
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTC2 1 dataset
Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 178 bp overlap
EP300 8 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP H1 ENCFF937OPV 205 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 355 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 196 bp overlap
ChIP hESC GSE17917.EP300.hESC 358 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 358 bp overlap
ChIP neural cell ENCFF442QNK 258 bp overlap
ChIP neural cell ENCFF442QNK 229 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 350 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 305 bp overlap
ChIP DE DE-FOXA2-2 214 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 206 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 312 bp overlap
ChIP DE DE-GATA4-2 350 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 337 bp overlap
ChIP DE DE-GATA6-2 291 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 334 bp overlap
JAZF1 1 dataset
ChIP WTC11 ENCFF958GRP 277 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 358 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 358 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 335 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 358 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 140 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 189 bp overlap
KLF4 3 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 277 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 328 bp overlap
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 299 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
MED1 2 datasets
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 56 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 358 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 358 bp overlap
MYB 1 dataset
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
Msgn1 1 dataset
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 319 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 354 bp overlap
ChIP H1 ENCFF747ZPQ 169 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 358 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 358 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 358 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 358 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 358 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 358 bp overlap
ChIP hESC GSE20650.NANOG.hESC 358 bp overlap
ChIP hESC GSE18292.NANOG.hESC 358 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap
NIPBL 6 datasets
ChIP WA09 GSE105028.NIPBL.WA09 358 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 263 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 304 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 281 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 276 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 328 bp overlap
NKX2-3 1 dataset
Motif ES_0h ES_0h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nkx2-1 1 dataset
Motif ES_0h ES_0h-Nkx2-1_MA1994.2 7 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PBX1 1 dataset
Motif ES_0h ES_0h-PBX1_MA0070.2 9 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 229 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 358 bp overlap
ChIP neural cell ENCFF604SPB 358 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU5F1 16 datasets
ChIP GM23338 ENCFF333SNB 284 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 358 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 358 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 358 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 193 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 357 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 358 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 358 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 358 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 303 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 358 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 358 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 358 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 242 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 339 bp overlap
PRDM14 3 datasets
ChIP hESC GSE22767.PRDM14.hESC 293 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 286 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 233 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 358 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 175 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 226 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 220 bp overlap
ChIP neural cell ENCFF882LXX 345 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 197 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 290 bp overlap
SIX5 2 datasets
ChIP H1 ENCFF942SOJ 237 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 178 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 323 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 358 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 301 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 269 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 226 bp overlap
SMARCA4 5 datasets
ChIP NSC GSE125033.SMARCA4.NSC 189 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 338 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 358 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 358 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 354 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 297 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 329 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 358 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 323 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 234 bp overlap
SOX2 6 datasets
ChIP H9 GSE46837.SOX2.H9 311 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 183 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 139 bp overlap
ChIP hESC GSE69479.SOX2.hESC 358 bp overlap
ChIP hESC GSE18292.SOX2.hESC 305 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 358 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 358 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 182 bp overlap
ChIP GM12891 ENCFF563IUT 161 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 127 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 225 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 273 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 358 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 358 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 215 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 311 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 282 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 328 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 183 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 345 bp overlap
ZNF324 1 dataset
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 278 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 190 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 333 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap