chr5 : 142,327,022 142,327,374
352 bp 65 TFs 2 linked genes
This 352 bp open chromatin element is linked to SPRY4-AS1 and SPRY4 and is bound by 65 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SPRY4-AS1 1.8 kb Proximal Proximity
SPRY4 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:142,322,022 – 142,332,374
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 244 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 112 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 199 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 111 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 176 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 352 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 264 bp overlap
BRD4 5 datasets
ChIP HCT-116_JQ1 GSE57628.BRD4.HCT-116_JQ1 177 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 208 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 97 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 306 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 292 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 231 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 113 bp overlap
CDK9 3 datasets
ChIP A-375_A771726 GSE68052.CDK9.A-375_A771726 171 bp overlap
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 352 bp overlap
ChIP A-375_DMSO GSE68052.CDK9.A-375_DMSO 352 bp overlap
CHD1 4 datasets
ChIP H1 ENCFF998XEK 60 bp overlap
ChIP H1 ENCFF998XEK 261 bp overlap
ChIP H1 ENCFF998XEK 352 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 248 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 277 bp overlap
CTCF 4 datasets
ChIP HFFc6 ENCFF005CJI 108 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 82 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 89 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 67 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 82 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 193 bp overlap
EZH2 2 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 221 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 164 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 116 bp overlap
FOXJ3 1 dataset
ChIP HepG2 ENCFF430OSX 215 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 352 bp overlap
KDM1A 4 datasets
ChIP A549 ENCFF633QSB 286 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 82 bp overlap
ChIP K562 ENCFF133OLU 242 bp overlap
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 206 bp overlap
KLF14 1 dataset
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 352 bp overlap
MAZ 3 datasets
ChIP A549 ENCFF935UWH 148 bp overlap
Motif DE_24h DE_24h-MAZ_MA1522.2 8 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 106 bp overlap
MED1 4 datasets
ChIP MDA-MB-231_LQ GSE95121.MED1.MDA-MB-231_LQ 352 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 97 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.MED1.SUM159PT_DMSO_24h 181 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 309 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 352 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 294 bp overlap
MEIS1 1 dataset
ChIP A-673 GSE109477.MEIS1.A-673 162 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 76 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 192 bp overlap
MYC 1 dataset
ChIP MIA-PaCa-2_CM GSE143804.MYC.MIA-PaCa-2_CM 207 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 198 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 129 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 92 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 197 bp overlap
ONECUT1 1 dataset
ChIP HepG2 ENCFF243FIR 73 bp overlap
PATZ1 1 dataset
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 338 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 248 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 137 bp overlap
ChIP HCT116 ENCFF849NGT 321 bp overlap
ChIP HCT116 ENCFF849NGT 118 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 121 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 293 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 150 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 79 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 292 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 254 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 284 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 352 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 254 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 197 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 162 bp overlap
SMARCC1 2 datasets
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 352 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 208 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 271 bp overlap
STAT3 1 dataset
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 109 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 347 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 57 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 230 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 285 bp overlap
TAF1 4 datasets
ChIP H1 ENCFF478SZO 281 bp overlap
ChIP H1 ENCFF478SZO 63 bp overlap
ChIP PFSK-1 ENCFF982LZL 264 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 196 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 325 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 318 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 200 bp overlap
ChIP hESC GSE122298.TBP.hESC 266 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 210 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 200 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 138 bp overlap
TP53 3 datasets
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 78 bp overlap
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 352 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 175 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 182 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 66 bp overlap
ZBTB2 1 dataset
ChIP HepG2 ENCFF605PMZ 332 bp overlap
ZFP91 3 datasets
ChIP K-562 ENCSR898XMH.ZFP91.K-562 325 bp overlap
ChIP K562 ENCFF501CDP 204 bp overlap
ChIP K562 ENCFF501CDP 204 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF24 15 datasets
ChIP GM12878 ENCFF688STO 132 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 182 bp overlap
ChIP HEK293 ENCFF308WOW 102 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 139 bp overlap
ChIP Hep-G2 ENCSR362NWP.ZNF24.Hep-G2 247 bp overlap
ChIP Hep-G2 ENCSR791AGT.ZNF24.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF086UMQ 116 bp overlap
ChIP HepG2 ENCFF357JVV 55 bp overlap
ChIP HepG2 ENCFF361LZL 93 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 260 bp overlap
ChIP K562 ENCFF497GLV 139 bp overlap
ChIP K562 ENCFF615YYW 352 bp overlap
ChIP K562 ENCFF781QQQ 199 bp overlap
ChIP K562 ENCFF877JCX 335 bp overlap
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 173 bp overlap
ZNF501 1 dataset
ChIP HepG2 ENCFF879XZR 189 bp overlap