chr5 : 107,512,089 – 107,512,342
253 bp 66 TFs 0 linked genes
This 253 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:107,507,089 – 107,517,342
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 169 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 123 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 240 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 136 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 222 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 167 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 155 bp overlap
BRD4 2 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 99 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 253 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 253 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 173 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 253 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 253 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EP300 3 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 131 bp overlap
ChIP hESC GSE17917.EP300.hESC 253 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 242 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 211 bp overlap
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 193 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 253 bp overlap
GABPA 1 dataset
ChIP GM12878 ENCSR331HPA.GABPA.GM12878 121 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 216 bp overlap
HOXD12::ELK1 1 dataset
Motif ES_0h ES_0h-HOXD12ELK1_MA1958.2 13 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 133 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 253 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MED1 1 dataset
ChIP OCI-Ly1 GSE53601.MED1.OCI-Ly1 172 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap
MEIS3 2 datasets
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 242 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 161 bp overlap
ChIP H1 ENCFF747ZPQ 209 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 253 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 253 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 221 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 253 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 253 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 253 bp overlap
ChIP hESC GSE20650.NANOG.hESC 251 bp overlap
ChIP hESC GSE18292.NANOG.hESC 251 bp overlap
NCOR1 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 146 bp overlap
NEUROG2 1 dataset
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 240 bp overlap
Nr2e1 1 dataset
Motif ES_0h ES_0h-Nr2e1_MA0676.1 9 bp overlap
ONECUT1 2 datasets
Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap
Motif ES_0h ES_0h-ONECUT1_MA0679.3 9 bp overlap
PBX1 4 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 238 bp overlap
ChIP A549 ENCFF475JCE 253 bp overlap
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
Motif ES_0h ES_0h-PBX1_MA0070.2 9 bp overlap
PBX3 5 datasets
ChIP A-549 ENCSR000BTN.PBX3.A-549 123 bp overlap
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
ChIP GM12878 ENCFF285BQQ 68 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 201 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 253 bp overlap
PKNOX1 10 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 253 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 253 bp overlap
ChIP HEK293T ENCFF174WDB 236 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 253 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 253 bp overlap
ChIP K562 ENCFF236IUS 226 bp overlap
ChIP MCF-7 ENCFF116OCS 253 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 253 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU5F1 5 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 253 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 253 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 253 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 253 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP GM12878 ENCFF101UQZ 72 bp overlap
RELA 1 dataset
Motif ES_0h ES_0h-RELA_MA0107.1 10 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 130 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 253 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 253 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 253 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 253 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 253 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 221 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 253 bp overlap
SOX2 7 datasets
ChIP HNSC GSE69479.SOX2.HNSC 253 bp overlap
ChIP NPC GSE122631.SOX2.NPC 253 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 173 bp overlap
ChIP hESC GSE18292.SOX2.hESC 232 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 253 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 202 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 253 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 253 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 203 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 191 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 206 bp overlap
SPI1 1 dataset
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 155 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 161 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 121 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 71 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 212 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 54 bp overlap
TP53 3 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 252 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 184 bp overlap
TWIST1 1 dataset
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
YY1 3 datasets
ChIP GM12892 ENCSR000BLT.YY1.GM12892 102 bp overlap
ChIP H1 ENCFF524BTL 253 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 221 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 185 bp overlap
ZNF184 2 datasets
ChIP WTC11 ENCFF352POG 253 bp overlap
ChIP WTC11 ENCFF352POG 55 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 253 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF740 1 dataset
Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 158 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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