chr1 : 95,039,787 – 95,040,023
236 bp 59 TFs 0 linked genes
This 236 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:95,034,787 – 95,045,023
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 236 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 199 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 163 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 236 bp overlap
BRD4 3 datasets
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 168 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 168 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 236 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 229 bp overlap
ChIP K562 ENCFF963TXY 190 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 236 bp overlap
ChIP K562 ENCFF673OEZ 236 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 236 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 236 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 236 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 133 bp overlap
EGR1 8 datasets
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 142 bp overlap
ChIP HCT116 ENCFF456NPQ 236 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 236 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 158 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 193 bp overlap
ChIP K562 ENCFF006PJY 217 bp overlap
ChIP K562 ENCFF113OPQ 113 bp overlap
ChIP K562 ENCFF895KGN 236 bp overlap
ESR1 2 datasets
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 111 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 236 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 232 bp overlap
FOS 2 datasets
ChIP MCF-7 ENCFF282FWZ 229 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 236 bp overlap
FOSL1 3 datasets
ChIP HCT116 ENCFF540ZXN 236 bp overlap
ChIP K-562 ENCSR000BMV.FOSL1.K-562 190 bp overlap
ChIP K562 ENCFF728OTE 225 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 183 bp overlap
ChIP K562 ENCFF996TSW 223 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF352QVM 236 bp overlap
ChIP MCF-7 ENCFF437NQS 236 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 236 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 212 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 236 bp overlap
ChIP HEK293 ENCFF299RSE 61 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 164 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 205 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 131 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 141 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 140 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 206 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 230 bp overlap
ChIP K562 ENCFF744ALD 236 bp overlap
JUN 8 datasets
ChIP 786-O GSE86092.JUN.786-O 167 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 236 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 236 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 236 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 227 bp overlap
ChIP MCF-7_E2 GSE102410.JUN.MCF-7_E2 180 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 236 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 236 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 140 bp overlap
ChIP K562 ENCFF830LVJ 236 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 214 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 190 bp overlap
ChIP K562 ENCFF128TYE 236 bp overlap
ChIP K562 ENCFF133OLU 236 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 236 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 157 bp overlap
MAX 2 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 127 bp overlap
ChIP HCT116 ENCFF810LEN 236 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 129 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 191 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 123 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 178 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 99 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 192 bp overlap
ChIP K562 ENCFF674RQA 236 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 236 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 236 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 179 bp overlap
PKNOX1 2 datasets
ChIP MCF-7 ENCFF116OCS 236 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 199 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 104 bp overlap
RBAK 1 dataset
ChIP HEK293 ENCFF263SUK 135 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 153 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 111 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 236 bp overlap
REST 5 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 122 bp overlap
ChIP K562 ENCFF430APM 145 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 145 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 71 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 182 bp overlap
SIN3A 2 datasets
ChIP HCT116 ENCFF203YBB 236 bp overlap
ChIP MCF-7 ENCFF521RDC 236 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 222 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 236 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 154 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 236 bp overlap
SMAD3 2 datasets
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 167 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 208 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 57 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 129 bp overlap
SMARCE1 1 dataset
ChIP MCF-7 ENCSR431TLD.SMARCE1.MCF-7 160 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 111 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 172 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 173 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 189 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
ChIP K562 ENCFF620GMX 236 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 214 bp overlap
ChIP K562 ENCFF931DJY 207 bp overlap
TCF7L2 1 dataset
ChIP MCF-7 ENCFF219LIX 236 bp overlap
TEAD4 4 datasets
ChIP K562 ENCFF673NIK 236 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 81 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 88 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 145 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 99 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR957LDM.TRIM24.K-562 197 bp overlap
ChIP K-562 ENCSR907MZR.TRIM24.K-562 168 bp overlap
ChIP K562 ENCFF284DKY 236 bp overlap
ChIP K562 ENCFF616RIL 236 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 236 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 53 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 211 bp overlap
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