chr1 : 87,968,227 87,968,415
188 bp 69 TFs 0 linked genes
This 188 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:87,963,227 – 87,973,415
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 5 datasets
ChIP prostate GSE56288.AR.prostate 188 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 183 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 83 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 89 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 143 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 88 bp overlap
BRD4 6 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 188 bp overlap
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 188 bp overlap
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 84 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 168 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.BRD4.HUVEC-C_TNF_JQ1 119 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 188 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 181 bp overlap
ChIP IMR-90 ENCFF468UGY 171 bp overlap
CEBPD 1 dataset
ChIP HAEC_IL1b_4h GSE89970.CEBPD.HAEC_IL1b_4h 141 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 188 bp overlap
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 143 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 170 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 170 bp overlap
ERG 8 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 188 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 163 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 188 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 175 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 61 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 147 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 188 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 188 bp overlap
ESR1 10 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 187 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 188 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 188 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 188 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 188 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 188 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 165 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 188 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 82 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 188 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 188 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 108 bp overlap
FLI1 3 datasets
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 188 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 188 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 155 bp overlap
FOS 4 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 188 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 59 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 188 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 57 bp overlap
FOSL1 2 datasets
ChIP BT-549 GSE46166.FOSL1.BT-549 188 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 181 bp overlap
FOSL2 1 dataset
ChIP hESC GSE69539.FOSL2.hESC 178 bp overlap
FOXL2 5 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 188 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 106 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 188 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 175 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 188 bp overlap
FOXO1 1 dataset
ChIP primary-chondrocyte GSE144026.FOXO1.primary-chondrocyte 91 bp overlap
GATA2 9 datasets
ChIP ESF GSE108408.GATA2.ESF 188 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 72 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 188 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 169 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 188 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 188 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 188 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 188 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 188 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 188 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 66 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 85 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 166 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 188 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 146 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 188 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 188 bp overlap
JUN 3 datasets
ChIP BT-549 GSE46166.JUN.BT-549 188 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 172 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 186 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 188 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 57 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 137 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 157 bp overlap
MED1 12 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 161 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 185 bp overlap
ChIP hMSC-TERT4_D0 GSE104537.MED1.hMSC-TERT4_D0 130 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 156 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 188 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 171 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 142 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 62 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 143 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 155 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 174 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 142 bp overlap
MED12 3 datasets
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 54 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 62 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 84 bp overlap
MYCN 4 datasets
ChIP Kelly GSE94822.MYCN.Kelly 175 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 151 bp overlap
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 93 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 143 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 188 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 188 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 141 bp overlap
NFIC 3 datasets
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 155 bp overlap
ChIP SK-N-SH ENCFF965AKM 188 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 167 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR338MMB.NR2F2.liver 168 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 188 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 187 bp overlap
PGR 5 datasets
ChIP hESC GSE69539.PGR.hESC 165 bp overlap
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 124 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 188 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 145 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 67 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 147 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 188 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 188 bp overlap
RAD21 1 dataset
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 149 bp overlap
RBPJ 1 dataset
ChIP GIC GSE79734.RBPJ.GIC 74 bp overlap
RELA 37 datasets
ChIP 786-O GSE109953.RELA.786-O 167 bp overlap
ChIP HAEC GSE89970.RELA.HAEC 168 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 175 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 164 bp overlap
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 188 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 164 bp overlap
ChIP HeLa-B2_TNFA GSE24518.RELA.HeLa-B2_TNFA 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 154 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 110 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 144 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D24 GSE139377.RELA.aortic-endothelial-cell_IL1B_D24 125 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 183 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 152 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 180 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 176 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 170 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 143 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 140 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 63 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 188 bp overlap
RXRA 3 datasets
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 188 bp overlap
ChIP SK-N-SH ENCFF893DLM 184 bp overlap
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 154 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 124 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 86 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 132 bp overlap
SMAD3 2 datasets
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 188 bp overlap
ChIP LX2_TGFB1 GSE38103.SMAD3.LX2_TGFB1 131 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 81 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 188 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 142 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 153 bp overlap
SMARCC1 3 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 188 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 188 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 110 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 85 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 188 bp overlap
STAT3 3 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 188 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 188 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 188 bp overlap
TAL1 1 dataset
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 104 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 188 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 110 bp overlap
TCF7L2 2 datasets
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 188 bp overlap
ChIP Panc1 ENCFF829HHL 188 bp overlap
TEAD1 1 dataset
ChIP CCLP1 GSE62272.TEAD1.CCLP1 85 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 188 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 146 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE15780.TP53.SaOS-2 131 bp overlap
TWIST1 1 dataset
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 111 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 188 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 188 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 164 bp overlap