chr4 : 173,214,362 – 173,214,712
350 bp 77 TFs 0 linked genes
This 350 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:173,209,362 – 173,219,712
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 219 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 159 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 126 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 268 bp overlap
ChIP K562 ENCFF938UXQ 228 bp overlap
ARID3A 1 dataset
ChIP K562 ENCFF728CDS 207 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 141 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 350 bp overlap
BCL11A 4 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 134 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 83 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 73 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 84 bp overlap
BRD4 4 datasets
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 52 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 64 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 119 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 238 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 252 bp overlap
ChIP K562 ENCFF673OEZ 131 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 181 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 95 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 267 bp overlap
CTCF 1 dataset
ChIP Kasumi-1_siRE GSE121280.CTCF.Kasumi-1_siRE 57 bp overlap
DDX20 1 dataset
ChIP K-562 ENCSR446LAV.DDX20.K-562 115 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 175 bp overlap
ChIP K562 ENCFF775HUO 157 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 300 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 125 bp overlap
ESR1 21 datasets
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 235 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 350 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 202 bp overlap
ChIP MCF-7 GSE128445.ESR1.MCF-7 212 bp overlap
ChIP MCF-7 GSE45822.ESR1.MCF-7 199 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 269 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 149 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 191 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 170 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 176 bp overlap
ChIP MCF-7_SHFOXA1_E2_TNF GSE59530.ESR1.MCF-7_SHFOXA1_E2_TNF 167 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 198 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 198 bp overlap
ChIP T-47D-B_E2_R5020 GSE80358.ESR1.T-47D-B_E2_R5020 191 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 186 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 164 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 154 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 163 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 205 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 249 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 174 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 197 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 283 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 179 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 343 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 205 bp overlap
FOXA1 2 datasets
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 193 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 92 bp overlap
GATA1 13 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 173 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 109 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 178 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 180 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 297 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 119 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 208 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 202 bp overlap
ChIP K562 ENCFF094CMK 227 bp overlap
ChIP erythroblast ENCFF867JAR 350 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 350 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 130 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 268 bp overlap
GATA2 9 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 165 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 350 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 186 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 235 bp overlap
ChIP K562 ENCFF513FTZ 255 bp overlap
ChIP K562 ENCFF544PCK 224 bp overlap
ChIP K562 ENCFF830LLA 350 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 297 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 130 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 242 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 146 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 247 bp overlap
GATA4 7 datasets
ChIP A-549 GSE85002.GATA4.A-549 162 bp overlap
ChIP DE DE-GATA4-1 350 bp overlap
ChIP DE DE-GATA4-2 350 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 274 bp overlap
ChIP foregut GSE117136.GATA4.foregut 350 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 347 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 242 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 288 bp overlap
ChIP DE DE-GATA6-2 350 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 284 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 315 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 275 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 334 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 310 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 313 bp overlap
ChIP foregut GSE117136.GATA6.foregut 350 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 224 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 343 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 322 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 155 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 202 bp overlap
ChIP K562 ENCFF968WBH 317 bp overlap
HDAC2 5 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 264 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 189 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 186 bp overlap
ChIP K562 ENCFF738SPU 203 bp overlap
ChIP K562 ENCFF744ALD 287 bp overlap
HES1 2 datasets
ChIP K-562 ENCSR091JXL.HES1.K-562 146 bp overlap
ChIP K562 ENCFF919JVU 257 bp overlap
HMBOX1 5 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 350 bp overlap
ChIP K562 ENCFF055GAZ 232 bp overlap
ChIP K562 ENCFF055GAZ 328 bp overlap
ChIP K562 ENCFF317JJX 228 bp overlap
ChIP K562 ENCFF317JJX 321 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 301 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 150 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 255 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 242 bp overlap
ChIP K562 ENCFF128TYE 296 bp overlap
ChIP K562 ENCFF133OLU 294 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 272 bp overlap
MTA3 1 dataset
ChIP K562 ENCFF289UFB 344 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 129 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 214 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 110 bp overlap
ChIP K562 ENCFF047YKA 227 bp overlap
NFIC 3 datasets
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 81 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 186 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 66 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 289 bp overlap
ChIP K562 ENCFF221HJH 196 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 301 bp overlap
ChIP K562 ENCFF004YPK 153 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 238 bp overlap
ChIP K562 ENCFF674RQA 188 bp overlap
NR3C1 4 datasets
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 78 bp overlap
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 82 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 227 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 190 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 179 bp overlap
PGR 4 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 228 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 175 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 217 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 188 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 148 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 221 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF419GHN 350 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 192 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 255 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 182 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 217 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 60 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 276 bp overlap
RELA 2 datasets
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 120 bp overlap
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 168 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 139 bp overlap
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 148 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 233 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 350 bp overlap
ChIP K562 ENCFF506JCB 202 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 335 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 231 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 229 bp overlap
ChIP K562 ENCFF690CFF 348 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 222 bp overlap
ChIP K562 ENCFF059YCJ 279 bp overlap
SP5_Hydra 1 dataset
ChIP HEK293_dDBD GSE110277.SP5_Hydra.HEK293_dDBD 160 bp overlap
STAT5A 2 datasets
ChIP K-562 ENCSR000BRR.STAT5A.K-562 163 bp overlap
ChIP K562 ENCFF226BTJ 288 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 64 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 209 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 166 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 139 bp overlap
ChIP K562 ENCFF620GMX 274 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 146 bp overlap
TCF7L2 4 datasets
ChIP HEK293 ENCFF513JQN 321 bp overlap
ChIP HEK293 ENCFF513JQN 329 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 190 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 208 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 297 bp overlap
TP63 10 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 89 bp overlap
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 115 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 231 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 177 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 51 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 120 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 96 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 130 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 111 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 59 bp overlap
TRIM28 1 dataset
ChIP K-562 ENCSR000BRW.TRIM28.K-562 168 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 247 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 350 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 204 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 350 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 209 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 232 bp overlap
ZNF843 1 dataset
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 201 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 159 bp overlap
ZSCAN29 1 dataset
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 217 bp overlap
Huangfu Lab · Publications · Resources · Contact