chr1 : 84,691,484 – 84,691,791

307 bp 66 TFs 1 linked gene

This 307 bp open chromatin element is linked to SSX2IP and is bound by 66 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
SSX2IP		1.2 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

AFF1 1 dataset

ChIP K-562 ENCSR426URK.AFF1.K-562 224 bp overlap

AHR 1 dataset

ChIP MCF-7_DMSO_45min GSE90550.AHR.MCF-7_DMSO_45min 118 bp overlap

ARID3A 1 dataset

ChIP GM12878 ENCSR725LYT.ARID3A.GM12878 99 bp overlap

ARNT 1 dataset

ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 265 bp overlap

ASH2L 1 dataset

ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 307 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 198 bp overlap

BRD2 5 datasets

ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 307 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 255 bp overlap

ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 209 bp overlap

ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 138 bp overlap

ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 240 bp overlap

BRD3 3 datasets

ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 227 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 276 bp overlap

ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 275 bp overlap

BRD4 12 datasets

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 203 bp overlap

ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 196 bp overlap

ChIP HCT-15 GSE73319.BRD4.HCT-15 137 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 307 bp overlap

ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 116 bp overlap

ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 130 bp overlap

ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 222 bp overlap

ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 181 bp overlap

ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 189 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 274 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 265 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 159 bp overlap

CBX4 1 dataset

ChIP HEK293T GSE53495.CBX4.HEK293T 253 bp overlap

CHD1 4 datasets

ChIP H1 ENCFF998XEK 57 bp overlap

ChIP H1 ENCFF998XEK 267 bp overlap

ChIP K-562 ENCSR000AQD.CHD1.K-562 50 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 187 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 229 bp overlap

CUX1 1 dataset

ChIP K562 ENCFF057AIX 139 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000AUQ.EP300.WA01 167 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 164 bp overlap

EZH2 3 datasets

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 96 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 264 bp overlap

ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 151 bp overlap

FOSL1 1 dataset

ChIP K562 ENCFF455MKD 80 bp overlap

GFI1B 1 dataset

ChIP K-562 ENCSR509GDT.GFI1B.K-562 124 bp overlap

GRHL2 2 datasets

ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 63 bp overlap

ChIP OVCA429 GSE71018.GRHL2.OVCA429 56 bp overlap

HDAC1 1 dataset

ChIP K-562 ENCSR711VWL.HDAC1.K-562 235 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 184 bp overlap

HDGF 1 dataset

ChIP K-562 ENCSR563YDA.HDGF.K-562 71 bp overlap

HES1 1 dataset

ChIP K-562 ENCSR091JXL.HES1.K-562 159 bp overlap

HMBOX1 1 dataset

ChIP K-562 ENCSR757IIU.HMBOX1.K-562 265 bp overlap

HMGA1 1 dataset

ChIP IMR-90_ctrl GSE111841.HMGA1.IMR-90_ctrl 115 bp overlap

HNRNPLL 2 datasets

ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 201 bp overlap

ChIP K-562 GSE120104.HNRNPLL.K-562 197 bp overlap

HOXA3 1 dataset

ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 127 bp overlap

IKZF1 4 datasets

ChIP K-562 ENCSR395HWC.IKZF1.K-562 307 bp overlap

ChIP K562 ENCFF348IBL 159 bp overlap

ChIP K562 ENCFF771OHZ 307 bp overlap

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 149 bp overlap

JUN 2 datasets

ChIP Karpas-299 GSE151413.JUN.Karpas-299 230 bp overlap

ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 198 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 177 bp overlap

KDM5B 2 datasets

ChIP K-562 ENCSR000AQA.KDM5B.K-562 119 bp overlap

ChIP K562 ENCFF049WWX 62 bp overlap

KMT2A 3 datasets

ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 169 bp overlap

ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 206 bp overlap

ChIP SEM GSE83671.KMT2A.SEM 307 bp overlap

MAX 2 datasets

ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 183 bp overlap

ChIP K-562 ENCSR000EFV.MAX.K-562 99 bp overlap

MEN1 2 datasets

ChIP MCF-7 GSE85317.MEN1.MCF-7 297 bp overlap

ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 120 bp overlap

MLLT1 2 datasets

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 307 bp overlap

ChIP K-562 ENCSR107GRP.MLLT1.K-562 307 bp overlap

MTA3 1 dataset

ChIP K-562 ENCSR180NCY.MTA3.K-562 196 bp overlap

MYBL2 1 dataset

ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 139 bp overlap

MYC 1 dataset

ChIP K-562 ENCSR000EGJ.MYC.K-562 175 bp overlap

MYCN 1 dataset

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 263 bp overlap

NBN 1 dataset

ChIP K-562 ENCSR085QEV.NBN.K-562 279 bp overlap

NR2F1 1 dataset

ChIP K-562 ENCSR970NKQ.NR2F1.K-562 238 bp overlap

NR2F2 1 dataset

ChIP K-562 ENCSR000BRS.NR2F2.K-562 198 bp overlap

PHIP 3 datasets

ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 167 bp overlap

ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 222 bp overlap

ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 307 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 227 bp overlap

PML 1 dataset

ChIP K-562 ENCSR000BQY.PML.K-562 219 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap

RBBP5 2 datasets

ChIP K-562 ENCSR000AQI.RBBP5.K-562 186 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 257 bp overlap

SAP30 2 datasets

ChIP K562 ENCFF652WJB 307 bp overlap

ChIP WA01 ENCSR000ATR.SAP30.WA01 138 bp overlap

SIN3A 1 dataset

ChIP K-562 ENCSR920BLG.SIN3A.K-562 71 bp overlap

SMARCC2 1 dataset

ChIP K-562 ENCSR519WMW.SMARCC2.K-562 283 bp overlap

SNAI1 1 dataset

ChIP HepG2 ENCFF017SIW 65 bp overlap

SNAI2 2 datasets

ChIP RD GSE137168.SNAI2.RD 210 bp overlap

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 185 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 298 bp overlap

TBP 2 datasets

ChIP K-562 GSE55306.TBP.K-562 175 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap

TCF3 1 dataset

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 207 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 107 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap

UBTF 2 datasets

ChIP K-562 ENCSR000EFZ.UBTF.K-562 165 bp overlap

ChIP K562 ENCFF775DLK 307 bp overlap

YY1 1 dataset

ChIP K-562 ENCSR000BMH.YY1.K-562 116 bp overlap

ZFY 1 dataset

ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 144 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 221 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 153 bp overlap

ZNF592 1 dataset

ChIP K-562 ENCSR249BHQ.ZNF592.K-562 215 bp overlap

ZNF598 1 dataset

ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 201 bp overlap

ZNF709 1 dataset

ChIP HepG2 ENCFF151DHM 307 bp overlap

ZNF786 1 dataset

ChIP Hep-G2 ENCSR206BVQ.ZNF786.Hep-G2 186 bp overlap