chr4 : 99,222,021 – 99,222,217
196 bp 75 TFs 1 linked gene
This 196 bp open chromatin element is linked to ADH6 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ADH6 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:99,217,021 – 99,227,217
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
AR 14 datasets
ChIP prostate GSE56288.AR.prostate 115 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 88 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 78 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 196 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 196 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 106 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 196 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 196 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 196 bp overlap
ChIP prostate_P13_T GSE130408.AR.prostate_P13_T 98 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 100 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 127 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 100 bp overlap
ChIP prostate_P5_T GSE130408.AR.prostate_P5_T 101 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 196 bp overlap
ATF3 1 dataset
ChIP liver ENCSR205FOW.ATF3.liver 196 bp overlap
BRD4 5 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 196 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 196 bp overlap
ChIP SGBS GSE64233.BRD4.SGBS 196 bp overlap
ChIP SGBS_TNF GSE64233.BRD4.SGBS_TNF 196 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 196 bp overlap
CEBPA 11 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF175DFS 189 bp overlap
ChIP SGBS GSE41629.CEBPA.SGBS 196 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 196 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 196 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 196 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 194 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 138 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 156 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 188 bp overlap
ChIP liver ERP002306.CEBPA.liver 196 bp overlap
CEBPB 8 datasets
ChIP H1 ENCFF871PTR 196 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 196 bp overlap
ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 162 bp overlap
ChIP HepG2 ENCFF074JWB 166 bp overlap
ChIP HepG2 ENCFF536NTI 193 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 196 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 196 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
ChIP HepG2 ENCFF345JDB 196 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 196 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 124 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 123 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 80 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 196 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 196 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 196 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 190 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 132 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 121 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 196 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 196 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 196 bp overlap
EP300 4 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF354ACD 196 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 175 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 168 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 81 bp overlap
FOXA1 21 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 96 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 143 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 156 bp overlap
ChIP LNCaP GSE56288.FOXA1.LNCaP 77 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 196 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 196 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 142 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 71 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 73 bp overlap
ChIP prostate_2078 GSE130408.FOXA1.prostate_2078 93 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 161 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 196 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 149 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 106 bp overlap
ChIP prostate_2484 GSE130408.FOXA1.prostate_2484 63 bp overlap
ChIP prostate_P1 GSE130408.FOXA1.prostate_P1 60 bp overlap
ChIP prostate_P13 GSE130408.FOXA1.prostate_P13 72 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 126 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 97 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 75 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 127 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 112 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 103 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 139 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 110 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 135 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 196 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 144 bp overlap
HLF 3 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 191 bp overlap
ChIP HepG2 ENCFF854JLR 110 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 135 bp overlap
HNF4A 3 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 96 bp overlap
ChIP liver ENCFF449HPV 196 bp overlap
ChIP liver ERP002306.HNF4A.liver 160 bp overlap
HNF4G 1 dataset
ChIP liver ENCFF170YNZ 196 bp overlap
HOXB13 21 datasets
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 76 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 68 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 151 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 196 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 163 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 183 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 196 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 172 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 119 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 194 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 164 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 109 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 69 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 144 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 147 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 137 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 120 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 196 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 120 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 195 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 155 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 196 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 151 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 154 bp overlap
MAX 1 dataset
ChIP liver ENCSR521IID.MAX.liver 124 bp overlap
MED1 16 datasets
ChIP SGBS GSE64233.MED1.SGBS 196 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 196 bp overlap
ChIP adipocyte GSE140782.MED1.adipocyte 196 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 196 bp overlap
ChIP hMSC-TERT4_D1 GSE104537.MED1.hMSC-TERT4_D1 135 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 196 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 196 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 196 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 184 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 196 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 196 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 196 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 196 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 196 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 196 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 196 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 189 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR000BRO.MYBL2.Hep-G2 168 bp overlap
ChIP HepG2 ENCFF176QIX 196 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 196 bp overlap
NFIL3 2 datasets
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
ChIP HepG2 ENCFF686VLI 196 bp overlap
NR3C1 1 dataset
ChIP HCC1937 GSE152203.NR3C1.HCC1937 196 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 196 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 140 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 171 bp overlap
POLR2A 4 datasets
ChIP esophagus muscularis mucosa ENCFF791ZXN 196 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 196 bp overlap
ChIP prostate gland ENCFF881OMH 97 bp overlap
ChIP sigmoid colon ENCFF748YVT 196 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 2 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 161 bp overlap
POU5F1B 1 dataset
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
PPARG 3 datasets
ChIP ASC GSE21366.PPARG.ASC 196 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 185 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 180 bp overlap
RAD21 3 datasets
ChIP liver ENCFF289RIE 138 bp overlap
ChIP liver ENCFF485PAC 196 bp overlap
ChIP liver ENCFF522JHE 196 bp overlap
RELA 2 datasets
ChIP SGBS GSE64233.RELA.SGBS 196 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 196 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 161 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 196 bp overlap
ChIP liver ENCFF807CIA 196 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 154 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 196 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 181 bp overlap
ChIP liver ENCFF769YSM 196 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 157 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 196 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 51 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 179 bp overlap
YY1 4 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 118 bp overlap
ChIP liver ENCFF400MBC 196 bp overlap
ChIP liver ENCFF515BWJ 196 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 196 bp overlap
ZBTB21 1 dataset
ChIP Hep-G2 ENCSR549PAU.ZBTB21.Hep-G2 161 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 172 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 196 bp overlap
ZNF12 1 dataset
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 123 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 169 bp overlap
ZNF362 1 dataset
ChIP HepG2 ENCFF256AZN 196 bp overlap
ZNF384 3 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF129PLC 196 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 165 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 124 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 148 bp overlap
ZNF652 3 datasets
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 196 bp overlap
ChIP HepG2 ENCFF331VPZ 196 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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