chr4 : 31,349,843 – 31,350,416
573 bp 93 TFs 1 linked gene
This 573 bp open chromatin element is linked to ENSG00000251434 and is bound by 93 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000251434 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:31,344,843 – 31,355,416
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 491 bp overlap
ChIP K562 ENCFF938UXQ 362 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 239 bp overlap
Atoh1 1 dataset
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 195 bp overlap
Bach1::Mafk 1 dataset
Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 355 bp overlap
ChIP K562 ENCFF963TXY 96 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 427 bp overlap
ChIP K562 ENCFF673OEZ 335 bp overlap
CHD7 1 dataset
ChIP K-562 ENCSR000AVD.CHD7.K-562 303 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 228 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 159 bp overlap
FEZF2 1 dataset
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOXA1 32 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 283 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 253 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 428 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 443 bp overlap
Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 157 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 223 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 192 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 229 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 285 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 237 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 199 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 299 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 189 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 231 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 415 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 355 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 259 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 419 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 156 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 430 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 414 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 421 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 163 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 144 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 192 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 333 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 321 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 276 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 258 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 396 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 166 bp overlap
FOXA2 10 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 347 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 446 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 283 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 344 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 238 bp overlap
ChIP DE DE-FOXA2-1 573 bp overlap
ChIP DE DE-FOXA2-2 523 bp overlap
Motif DE_60h DE_60h-FOXA2_MA0047.4 8 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 222 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 484 bp overlap
FOXA3 3 datasets
Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap
ChIP K562 ENCFF348SOM 431 bp overlap
ChIP K562 ENCFF781VSC 94 bp overlap
FOXD1 1 dataset
Motif DE_60h DE_60h-FOXD1_MA0031.2 7 bp overlap
FOXF2 1 dataset
Motif DE_60h DE_60h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap
GATA1 13 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 225 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 294 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 176 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 177 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 493 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 329 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 325 bp overlap
ChIP erythroblast ENCFF867JAR 417 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 573 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 173 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 242 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 289 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 275 bp overlap
GATA1::TAL1 1 dataset
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 286 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 536 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 376 bp overlap
ChIP DE DE-GATA4-2 499 bp overlap
ChIP foregut GSE117136.GATA4.foregut 438 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 549 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 441 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 349 bp overlap
ChIP DE DE-GATA6-2 494 bp overlap
ChIP foregut GSE117136.GATA6.foregut 475 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 446 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 362 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 209 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
IRF1 2 datasets
ChIP K-562 GSE129380.IRF1.K-562 199 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 181 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 352 bp overlap
KLF1 3 datasets
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
ChIP HUDEP-2_S4 GSE97671.KLF1.HUDEP-2_S4 153 bp overlap
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 75 bp overlap
KLF2 1 dataset
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 339 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 291 bp overlap
MAF 1 dataset
Motif DE_60h DE_60h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_60h DE_60h-MAFA_MA1521.2 13 bp overlap
MAFK 1 dataset
Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Mafg 1 dataset
Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR910JAI.NCOR1.K-562 257 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 423 bp overlap
ChIP K562 ENCFF788MPU 421 bp overlap
ChIP K562 ENCFF866HRM 445 bp overlap
NEUROG2 1 dataset
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 242 bp overlap
NR1I2 1 dataset
Motif DE_60h DE_60h-NR1I2_MA1533.2 15 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 191 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP erythroblast ENCFF498VMR 543 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 306 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 234 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SMAD1 1 dataset
ChIP CD34_ERYTH_BMP GSE29194.SMAD1.CD34_ERYTH_BMP 142 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 371 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 370 bp overlap
ChIP K562 ENCFF506JCB 517 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 213 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 236 bp overlap
SOX15 1 dataset
Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 296 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 335 bp overlap
ChIP K562 ENCFF059YCJ 143 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 211 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 234 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 573 bp overlap
TAF1 1 dataset
ChIP K-562 ENCSR000BKS.TAF1.K-562 166 bp overlap
TAL1 15 datasets
ChIP CD34 GSE52924.TAL1.CD34 351 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 332 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 419 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 322 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 241 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 313 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 373 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 403 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 380 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 376 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 177 bp overlap
ChIP K562 ENCFF620GMX 232 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 409 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 332 bp overlap
TAL1_SCL 1 dataset
ChIP Jurkat GSE25000.TAL1_SCL.Jurkat 107 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 332 bp overlap
ChIP K562 ENCFF931DJY 391 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 525 bp overlap
ChIP K562 ENCFF319QZT 205 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 365 bp overlap
ZBTB24 2 datasets
Motif DE_60h DE_60h-ZBTB24_MA2330.1 10 bp overlap
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 272 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 230 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 508 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF311 1 dataset
ChIP K-562 ENCSR388ZRV.ZNF311.K-562 301 bp overlap
ZNF354C 1 dataset
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
ZNF436 1 dataset
ChIP K-562 ENCSR335SUD.ZNF436.K-562 208 bp overlap
ZNF454 1 dataset
Motif DE_60h DE_60h-ZNF454_MA1712.2 17 bp overlap
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