chr2 : 197,578,358 – 197,578,944
586 bp 104 TFs 0 linked genes
This 586 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:197,573,358 – 197,583,944
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ARNT2 2 datasets
Motif DE_12h DE_12h-ARNT2_MA1464.2 8 bp overlap
Motif DE_24h DE_24h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_24h DE_24h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 2 datasets
Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap
Motif DE_24h DE_24h-Arnt_MA0004.1 6 bp overlap
Arntl 2 datasets
Motif DE_12h DE_12h-Arntl_MA0603.2 8 bp overlap
Motif DE_24h DE_24h-Arntl_MA0603.2 8 bp overlap
Atoh1 3 datasets
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
Motif DE_24h DE_24h-Atoh1_MA1467.3 7 bp overlap
Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap
BHLHE41 2 datasets
Motif DE_12h DE_12h-BHLHE41_MA0636.1 10 bp overlap
Motif DE_24h DE_24h-BHLHE41_MA0636.1 10 bp overlap
BRD4 6 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 134 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 158 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 137 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 123 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 157 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 136 bp overlap
CEBPA 2 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
Motif DE_24h DE_24h-CEBPA_MA0102.5 10 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Motif DE_24h DE_24h-CEBPD_MA0836.3 8 bp overlap
CREB1 4 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap
Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap
CREB3L4 2 datasets
Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap
Motif DE_24h DE_24h-CREB3L4_MA1474.2 10 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Creb3l2 2 datasets
Motif DE_12h DE_12h-Creb3l2_MA0608.1 9 bp overlap
Motif DE_24h DE_24h-Creb3l2_MA0608.1 9 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
E2F8 2 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 297 bp overlap
ETS1 1 dataset
ChIP GM23338 ENCFF701IZH 300 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif DE_24h DE_24h-FOS_MA1951.2 13 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 373 bp overlap
FOXN3 2 datasets
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif DE_24h DE_24h-FOXN3_MA1489.1 8 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 371 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif DE_24h DE_24h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif DE_24h DE_24h-Gli2_MA0734.4 9 bp overlap
HAND2 3 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_24h DE_24h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HES1 2 datasets
Motif DE_12h DE_12h-HES1_MA1099.3 8 bp overlap
Motif DE_24h DE_24h-HES1_MA1099.3 8 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 2 datasets
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Irf1 4 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
JUN 5 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 481 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 259 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 272 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif DE_24h DE_24h-MAFF_MA0495.4 11 bp overlap
MAX 3 datasets
Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap
Motif DE_24h DE_24h-MAX_MA0058.4 6 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 161 bp overlap
MAX::MYC 2 datasets
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
Motif DE_24h DE_24h-MAXMYC_MA0059.2 10 bp overlap
MED1 3 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 84 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 149 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 192 bp overlap
MEIS1 4 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MITF 4 datasets
Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap
Motif DE_24h DE_24h-MITF_MA0620.4 10 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 156 bp overlap
ChIP K562 ENCFF731XJJ 114 bp overlap
MLX 2 datasets
Motif DE_12h DE_12h-MLX_MA0663.1 10 bp overlap
Motif DE_24h DE_24h-MLX_MA0663.1 10 bp overlap
MLXIPL 2 datasets
Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap
Motif DE_24h DE_24h-MLXIPL_MA0664.2 8 bp overlap
MNT 2 datasets
Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap
Motif DE_24h DE_24h-MNT_MA0825.2 6 bp overlap
MYC 2 datasets
Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap
Motif DE_24h DE_24h-MYC_MA0147.4 8 bp overlap
Mafb 2 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif DE_24h DE_24h-Mafb_MA0117.3 11 bp overlap
Mlxip 2 datasets
Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap
Motif DE_24h DE_24h-Mlxip_MA0622.2 6 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 276 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 114 bp overlap
ChIP H1 ENCFF747ZPQ 236 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 255 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 218 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 209 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 159 bp overlap
NEUROD1 3 datasets
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_24h DE_24h-NEUROD1_MA1109.2 8 bp overlap
Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 3 datasets
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_24h DE_24h-NEUROG2_MA1642.2 7 bp overlap
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
NFATC4 2 datasets
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Motif DE_24h DE_24h-NFATC4_MA1525.3 9 bp overlap
NR1D1 2 datasets
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
Motif DE_24h DE_24h-NR1D1_MA1531.2 14 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_24h DE_24h-NR2F1_MA0017.3 12 bp overlap
NRL 2 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif DE_24h DE_24h-NRL_MA0842.3 12 bp overlap
Neurod2 3 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_24h DE_24h-Neurod2_MA0668.3 8 bp overlap
Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_24h DE_24h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 365 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 242 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 283 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 53 bp overlap
ChIP HepG2 ENCFF188FEZ 247 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
REL 2 datasets
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
Motif DE_24h DE_24h-REL_MA0101.1 10 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
RELB 2 datasets
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
Motif DE_24h DE_24h-RELB_MA1117.2 7 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 440 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 155 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 321 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
Motif DE_24h DE_24h-SREBF2_MA0828.3 10 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 185 bp overlap
TBP 2 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap
TBX19 2 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
TCF12 1 dataset
ChIP H1 ENCFF203EBH 241 bp overlap
TFE3 2 datasets
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
Motif DE_24h DE_24h-TFE3_MA0831.3 10 bp overlap
TFEB 2 datasets
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
Motif DE_24h DE_24h-TFEB_MA0692.2 8 bp overlap
TFEC 2 datasets
Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap
Motif DE_24h DE_24h-TFEC_MA0871.3 8 bp overlap
TWIST1 3 datasets
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Motif DE_24h DE_24h-TWIST1_MA1123.3 8 bp overlap
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
USF1 6 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 150 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 146 bp overlap
ChIP WTC11 ENCFF699QGS 279 bp overlap
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 4 datasets
Motif DE_12h DE_12h-USF2_MA0526.5 10 bp overlap
Motif DE_24h DE_24h-USF2_MA0526.5 10 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 116 bp overlap
ChIP WTC11 ENCFF139JAW 164 bp overlap
Yy1 2 datasets
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
Motif DE_24h DE_24h-Yy1_MA0095.4 8 bp overlap
ZIM3 2 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif DE_24h DE_24h-ZIM3_MA1709.2 11 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF140 2 datasets
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
Motif DE_24h DE_24h-ZNF140_MA1589.2 19 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF384 3 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif DE_24h DE_24h-ZNF384_MA1125.2 8 bp overlap
ZNF449 3 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif DE_24h DE_24h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF454 2 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif DE_24h DE_24h-ZNF454_MA1712.2 17 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
ZNF784 2 datasets
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap
Motif DE_24h DE_24h-ZNF784_MA1717.2 8 bp overlap
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