chr20 : 62,474,110 62,474,586
476 bp 94 TFs 1 linked gene
This 476 bp open chromatin element is linked to GATA5 and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GATA5 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:62,469,110 – 62,479,586
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 452 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 425 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ARID1A 2 datasets
ChIP H9 GSE139260.ARID1A.H9 330 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 283 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 360 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 185 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 150 bp overlap
BRD4 10 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 281 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 379 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 138 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 283 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 406 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 338 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 359 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 318 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 250 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 476 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 204 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 264 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 191 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 187 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 261 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 476 bp overlap
CTCF 8 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 201 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 351 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 181 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 309 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 260 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 103 bp overlap
ChIP neural crest cell ENCFF182LWK 307 bp overlap
ChIP spleen ENCFF065CBS 433 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 327 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 375 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 131 bp overlap
ELF1 1 dataset
ChIP ME-1 GSE46044.ELF1.ME-1 224 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 237 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 211 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 200 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 384 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 269 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 476 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 323 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 338 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 220 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 253 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 346 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 203 bp overlap
EZH2 22 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 403 bp overlap
ChIP A673 ENCFF790MVL 168 bp overlap
ChIP A673 ENCFF955JRZ 180 bp overlap
ChIP GM23248 ENCFF506FWX 68 bp overlap
ChIP GM23338 ENCFF613YON 88 bp overlap
ChIP H1 ENCFF232NZA 476 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 266 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 72 bp overlap
ChIP T98G GSE112240.EZH2.T98G 238 bp overlap
ChIP astrocyte ENCFF365JTP 476 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 140 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 88 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 157 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 237 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 139 bp overlap
ChIP hepatocyte ENCFF118DKH 348 bp overlap
ChIP hepatocyte ENCFF552DZB 201 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 181 bp overlap
ChIP myotube ENCFF857GWB 356 bp overlap
ChIP neural cell ENCFF610EPB 217 bp overlap
ChIP neural progenitor cell ENCFF018MKA 476 bp overlap
ChIP neural progenitor cell ENCFF472NFV 476 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 339 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 476 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 130 bp overlap
GABPA 2 datasets
ChIP H1 ENCFF739QFD 341 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 476 bp overlap
GATA4 2 datasets
ChIP foregut GSE117136.GATA4.foregut 437 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 241 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 476 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 350 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 394 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 407 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 266 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 285 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 169 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 465 bp overlap
JUN 5 datasets
ChIP 786-O GSE86092.JUN.786-O 212 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 447 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 388 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 427 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 422 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 363 bp overlap
ChIP H1 ENCFF078LED 476 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 476 bp overlap
KDM5B 2 datasets
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 118 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 114 bp overlap
KLF4 1 dataset
ChIP MCF-7 ENCFF948KTQ 51 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 102 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 346 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 476 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 397 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 439 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 289 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NFKB1 2 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 228 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 432 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 476 bp overlap
PCGF2 3 datasets
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 59 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 253 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 114 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 363 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 278 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 427 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 357 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 418 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 435 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 290 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 476 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 455 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 397 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 428 bp overlap
REST 1 dataset
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 228 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 208 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 127 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 273 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 474 bp overlap
RUNX1 2 datasets
ChIP 697 GSE138031.RUNX1.697 110 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 381 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 337 bp overlap
SIN3A 2 datasets
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 392 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 53 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 254 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 476 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 367 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 476 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 476 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 260 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 254 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 466 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 384 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 457 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 294 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 419 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 409 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 354 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 336 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 476 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 268 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 285 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 335 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 256 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 90 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 72 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 476 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 462 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 130 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 351 bp overlap
SUZ12 6 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 415 bp overlap
ChIP H1 ENCFF881NFR 476 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 261 bp overlap
ChIP NT2/D1 ENCFF574SXS 63 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 160 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 87 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 153 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 409 bp overlap
TCF7L2 2 datasets
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 476 bp overlap
ChIP Panc1 ENCFF829HHL 429 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 282 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 186 bp overlap
TP63 2 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 249 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 373 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 453 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 476 bp overlap
ChIP K562 ENCFF427SDV 419 bp overlap
ChIP K562 ENCFF427SDV 361 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 78 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 259 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 121 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 88 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 242 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 125 bp overlap
ZSCAN29 1 dataset
ChIP K562 ENCFF797SOU 55 bp overlap