chr19 : 8,316,915 – 8,317,275
360 bp 81 TFs 4 linked genes
This 360 bp open chromatin element is linked to 4 target genes and is bound by 81 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NDUFA7 4.1 kb Proximal Proximity
ENSG00000167774 4.1 kb Proximal Proximity
RPS28 4.2 kb Proximal Proximity
CD320 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:8,311,915 – 8,322,275
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 137 bp overlap
BRD4 1 dataset
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 161 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 175 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 121 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 160 bp overlap
CTCF 41 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 138 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 214 bp overlap
ChIP BE2C ENCFF757SRF 239 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 142 bp overlap
ChIP DND-41 ENCFF913MRA 266 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 126 bp overlap
ChIP DOHH2 ENCFF637WNW 351 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 289 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 169 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 359 bp overlap
ChIP H1 ENCFF414GZI 214 bp overlap
ChIP H9 ENCFF152GTF 317 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 201 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 99 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 100 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 164 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 141 bp overlap
ChIP Loucy ENCFF359TVQ 180 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 264 bp overlap
ChIP MCF-7 ENCFF198DQX 228 bp overlap
ChIP MCF-7 ENCFF494VXA 228 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 181 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 252 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 185 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 156 bp overlap
ChIP OCI-LY1 ENCFF455ESK 360 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 360 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 296 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 299 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 149 bp overlap
ChIP SEM GSE117864.CTCF.SEM 130 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 116 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 257 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 129 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 149 bp overlap
ChIP endodermal cell ENCFF471YCZ 154 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 187 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 177 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 131 bp overlap
ChIP placenta ENCFF029PHY 287 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 114 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 250 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 73 bp overlap
DPF2 4 datasets
ChIP BIN-67 GSE117734.DPF2.BIN-67 187 bp overlap
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 198 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 169 bp overlap
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 206 bp overlap
DRAP1 1 dataset
ChIP GM12878 GSE97661.DRAP1.GM12878 146 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 139 bp overlap
EGR1 1 dataset
ChIP WA01 ENCSR000BJA.EGR1.WA01 108 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 226 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
ERG 4 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 124 bp overlap
ChIP SEM GSE117864.ERG.SEM 289 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 182 bp overlap
ChIP aortic-endothelial-cell_D19 GSE139377.ERG.aortic-endothelial-cell_D19 215 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 196 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 197 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 160 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 360 bp overlap
EZH2 1 dataset
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 196 bp overlap
FLI1 2 datasets
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 138 bp overlap
ChIP SEM GSE117864.FLI1.SEM 137 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 302 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 265 bp overlap
GATA6 5 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 354 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 260 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 307 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 335 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 254 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 205 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 140 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 159 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 314 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 309 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 275 bp overlap
JMJD1C 1 dataset
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 204 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 166 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 132 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MAX 7 datasets
ChIP H1 ENCFF914VQY 279 bp overlap
ChIP Ishikawa ENCFF064TDQ 310 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 155 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 188 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 262 bp overlap
ChIP P493-6 GSE42262.MAX.P493-6 235 bp overlap
ChIP P493-6_4HR GSE125863.MAX.P493-6_4HR 201 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 274 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 113 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 206 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 191 bp overlap
MXI1 2 datasets
ChIP H1 ENCFF963FZS 257 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 204 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 159 bp overlap
MYC 6 datasets
ChIP BL41 GSE30726.MYC.BL41 152 bp overlap
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 117 bp overlap
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 203 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 190 bp overlap
ChIP P493-6_SHTERC GSE60223.MYC.P493-6_SHTERC 162 bp overlap
ChIP Raji GSE30726.MYC.Raji 182 bp overlap
MYCN 2 datasets
ChIP BE2C GSE80151.MYCN.BE2C 240 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 240 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 248 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 290 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 166 bp overlap
NEUROD1 1 dataset
ChIP K-562 ENCSR986CDX.NEUROD1.K-562 115 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 176 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR338MMB.NR2F2.liver 230 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 222 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 276 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 206 bp overlap
POLR2A 7 datasets
ChIP GM12892 ENCFF542ZFO 214 bp overlap
ChIP H1 ENCFF566JSR 186 bp overlap
ChIP HeLa-S3 ENCFF224LWS 139 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 166 bp overlap
ChIP spleen ENCFF044PYR 236 bp overlap
ChIP spleen ENCFF446ZGT 360 bp overlap
ChIP spleen ENCFF706IUS 88 bp overlap
POLR2G 4 datasets
ChIP HepG2 ENCFF241AEG 72 bp overlap
ChIP HepG2 ENCFF241AEG 208 bp overlap
ChIP HepG2 ENCFF508UTS 65 bp overlap
ChIP K562 ENCFF047BLG 241 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 187 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 349 bp overlap
PRDM10 1 dataset
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 150 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 210 bp overlap
ChIP HepG2 ENCFF259LUZ 180 bp overlap
ChIP WTC11 ENCFF108TMF 204 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 240 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 140 bp overlap
RBFOX2 3 datasets
ChIP HepG2 ENCFF554DMZ 157 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 310 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 360 bp overlap
RUNX1 2 datasets
ChIP ALL-SIL GSE102209.RUNX1.ALL-SIL 123 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 256 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 229 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 134 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 198 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF896IJG 235 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 162 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 209 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 154 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 360 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 360 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 179 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 94 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 158 bp overlap
SMARCA4 2 datasets
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 353 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 217 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 360 bp overlap
SMC1A 1 dataset
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 148 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 301 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 255 bp overlap
SP1 4 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 144 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 151 bp overlap
ChIP H1 ENCFF263FUH 188 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 183 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 360 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 242 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 360 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 208 bp overlap
TBP 2 datasets
ChIP hESC_10h GSE122298.TBP.hESC_10h 238 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 169 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 246 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 240 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 211 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 298 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 186 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 329 bp overlap
ZNF274 3 datasets
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 170 bp overlap
ChIP NT2/D1 ENCFF960BHH 360 bp overlap
ChIP NT2/D1 ENCFF960BHH 360 bp overlap
ZNF598 1 dataset
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 193 bp overlap
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