chr18 : 22,165,323 22,166,006
683 bp 73 TFs 2 linked genes
This 683 bp open chromatin element is linked to GATA6-AS1 and GATA6 and is bound by 73 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GATA6-AS1 3.4 kb Proximal Proximity
GATA6 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:22,160,323 – 22,171,006
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 165 bp overlap
BCL11A 2 datasets
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 371 bp overlap
ChIP MDA-MB-157 ERP003925.BCL11A.MDA-MB-157 363 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 142 bp overlap
BRD2 7 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 494 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 444 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 678 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 678 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 272 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 272 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 436 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 481 bp overlap
BRD4 8 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 659 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 526 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 683 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 683 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 300 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 105 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 276 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 199 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 545 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 671 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 547 bp overlap
CTCF 7 datasets
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 142 bp overlap
ChIP body of pancreas ENCFF798MEO 297 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 183 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 112 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 76 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 184 bp overlap
ChIP transverse colon ENCFF749DPF 227 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 272 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 127 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 155 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 344 bp overlap
ChIP K-562 GSE23730.ERG.K-562 267 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 487 bp overlap
EZH2 53 datasets
ChIP A673 ENCFF790MVL 248 bp overlap
ChIP A673 ENCFF790MVL 307 bp overlap
ChIP A673 ENCFF790MVL 307 bp overlap
ChIP A673 ENCFF955JRZ 250 bp overlap
ChIP A673 ENCFF955JRZ 250 bp overlap
ChIP A673 ENCFF955JRZ 302 bp overlap
ChIP A673 ENCFF955JRZ 302 bp overlap
ChIP GM23248 ENCFF404ZHM 96 bp overlap
ChIP GM23248 ENCFF404ZHM 253 bp overlap
ChIP GM23248 ENCFF404ZHM 240 bp overlap
ChIP GM23248 ENCFF506FWX 127 bp overlap
ChIP GM23338 ENCFF613YON 349 bp overlap
ChIP GM23338 ENCFF613YON 310 bp overlap
ChIP GM23338 ENCFF886DXX 176 bp overlap
ChIP H1 ENCFF232NZA 683 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 683 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 683 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 175 bp overlap
ChIP SK-N-MC ENCFF434OHW 109 bp overlap
ChIP SK-N-MC ENCFF674XUJ 109 bp overlap
ChIP SK-N-MC ENCFF674XUJ 335 bp overlap
ChIP SK-N-SH ENCFF657FZK 219 bp overlap
ChIP astrocyte ENCFF365JTP 412 bp overlap
ChIP astrocyte ENCFF365JTP 364 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 241 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 124 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 156 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 97 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 683 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 368 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 342 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 497 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 127 bp overlap
ChIP hESC GSE113817.EZH2.hESC 683 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 424 bp overlap
ChIP hepatocyte ENCFF118DKH 247 bp overlap
ChIP hepatocyte ENCFF552DZB 119 bp overlap
ChIP hepatocyte ENCFF552DZB 575 bp overlap
ChIP hepatocyte ENCFF552DZB 212 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.EZH2.hiPSC_WTa_RNase-neg 450 bp overlap
ChIP keratinocyte ENCFF070STK 153 bp overlap
ChIP keratinocyte ENCFF070STK 87 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 151 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 148 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 70 bp overlap
ChIP myotube ENCFF857GWB 118 bp overlap
ChIP myotube ENCFF857GWB 137 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 346 bp overlap
ChIP neural progenitor cell ENCFF018MKA 683 bp overlap
ChIP neural progenitor cell ENCFF472NFV 683 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 604 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 222 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 242 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 324 bp overlap
ChIP DE DE-GATA4-2 331 bp overlap
ChIP G296S GSE85628.GATA4.G296S 291 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 291 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 216 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 150 bp overlap
ChIP foregut GSE117136.GATA4.foregut 376 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 374 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 456 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 325 bp overlap
ChIP DE DE-GATA6-2 683 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 349 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 680 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 346 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 632 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 683 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 351 bp overlap
ChIP foregut GSE117136.GATA6.foregut 374 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 389 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 388 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 371 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 509 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 253 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 336 bp overlap
HMGB1 1 dataset
ChIP HUVEC-C GSE98245.HMGB1.HUVEC-C 233 bp overlap
INO80 2 datasets
ChIP Huh-7 GSE97411.INO80.Huh-7 232 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 138 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 179 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 415 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 233 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 174 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 664 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 249 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 608 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 673 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 209 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 175 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 331 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 296 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 238 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 339 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 251 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 233 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 164 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 227 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 658 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 321 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 178 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 162 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 151 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 246 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 226 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 158 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 135 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 361 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 345 bp overlap
POLR2A 2 datasets
ChIP body of pancreas ENCFF501FEC 136 bp overlap
ChIP body of pancreas ENCFF675RCN 93 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 683 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 302 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 184 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 463 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 683 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 152 bp overlap
RELA 2 datasets
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 172 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 314 bp overlap
ChIP H1 ENCFF239FFS 312 bp overlap
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 67 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 187 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 683 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 575 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 253 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 392 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 273 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 167 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 683 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 351 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 161 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 232 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 595 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 247 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 172 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 51 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 129 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 503 bp overlap
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 104 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 227 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 683 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 63 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 573 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 592 bp overlap
SRSF3 1 dataset
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 173 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 220 bp overlap
SUZ12 13 datasets
ChIP GM12878 ENCFF498QAM 173 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 104 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 194 bp overlap
ChIP H1 ENCFF881NFR 683 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 177 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 113 bp overlap
ChIP NT2/D1 ENCFF574SXS 683 bp overlap
ChIP NT2/D1 ENCFF574SXS 534 bp overlap
ChIP NT2/D1 ENCFF574SXS 221 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 294 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 148 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.SUZ12.hiPSC_WTb_RNase-neg 477 bp overlap
TBX5 10 datasets
ChIP G296S GSE85628.TBX5.G296S 250 bp overlap
ChIP G296S GSE85628.TBX5.G296S 240 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 250 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 240 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 185 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 106 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 106 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 219 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 117 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 153 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 257 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 191 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 123 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 206 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 192 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 112 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 267 bp overlap
TRIM25 2 datasets
ChIP BT-549 GSE79588.TRIM25.BT-549 215 bp overlap
ChIP BT-549 GSE79588.TRIM25.BT-549 240 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 112 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 372 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 69 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 673 bp overlap