chr17 : 67,752,011 67,752,512
501 bp 77 TFs 6 linked genes
This 501 bp open chromatin element is linked to 6 target genes and is bound by 77 transcription factors.
Linked Genes
6 genes
Link type
Gene Expression Dist. to TSS Distance Link type
NOL11 34.5 kb Distal Multiome
BPTF 73.1 kb Distal Multiome
C17orf58 241.2 kb Distal Multiome
KPNA2 283.3 kb Distal Multiome
PITPNC1 373.4 kb Distal Multiome+HiCAR
PSMD12 385.8 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:67,747,011 – 67,757,512
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 352 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 185 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 186 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 192 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 154 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 191 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 177 bp overlap
CEBPA 1 dataset
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 173 bp overlap
ChIP MCF-7 ENCFF772ZTQ 193 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CEBPG 1 dataset
Motif ES_0h ES_0h-CEBPG_MA0838.1 10 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 412 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 164 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 160 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 234 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 251 bp overlap
ChIP BLaER1 ENCFF364PUR 169 bp overlap
ChIP BLaER1 ENCFF460KDD 275 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DBP 1 dataset
Motif ES_0h ES_0h-DBP_MA0639.2 10 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 129 bp overlap
ChIP hESC GSE17917.EP300.hESC 392 bp overlap
ESR1 1 dataset
Motif ES_0h ES_0h-ESR1_MA0112.4 15 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 307 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 216 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 201 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 205 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 172 bp overlap
IRF2 1 dataset
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 370 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 304 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 255 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 265 bp overlap
JUND 3 datasets
ChIP H1 ENCFF468JZD 174 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 168 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 149 bp overlap
KLF17 1 dataset
Motif ES_0h ES_0h-KLF17_MA1514.2 14 bp overlap
KLF4 4 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 304 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 190 bp overlap
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 175 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 225 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 233 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 253 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 135 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 197 bp overlap
ChIP H1 ENCFF747ZPQ 195 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 397 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 304 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 223 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 479 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 293 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 308 bp overlap
ChIP hESC GSE18292.NANOG.hESC 232 bp overlap
ChIP hESC GSE20650.NANOG.hESC 229 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCFF925CGH 318 bp overlap
NIPBL 5 datasets
ChIP WA09 GSE105028.NIPBL.WA09 206 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 189 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 172 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 206 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 198 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 223 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 141 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 235 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 317 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 178 bp overlap
POU5F1 17 datasets
ChIP GM23338 ENCFF333SNB 77 bp overlap
ChIP H1 ENCFF698ZAP 177 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 341 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 307 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 386 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 222 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 231 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 184 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 270 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 245 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 237 bp overlap
ChIP hESC GSE20650.POU5F1.hESC 161 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 301 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 353 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 247 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 172 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 198 bp overlap
PPARG 1 dataset
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
PRDM14 2 datasets
ChIP hESC GSE22767.PRDM14.hESC 319 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 126 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 275 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 249 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 320 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 232 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 185 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 253 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 230 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 222 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 185 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 211 bp overlap
ChIP hESC_DIFF_D1 GSE75297.SMAD3.hESC_DIFF_D1 190 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 207 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 181 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 276 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 267 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 263 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 259 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 435 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 236 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 291 bp overlap
SOX13 1 dataset
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 7 datasets
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP H9 GSE46837.SOX2.H9 130 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 216 bp overlap
ChIP hESC GSE18292.SOX2.hESC 241 bp overlap
ChIP hESC GSE69479.SOX2.hESC 207 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 270 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 254 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 276 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 224 bp overlap
Sox3 1 dataset
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 130 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 156 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 167 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 217 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 283 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 455 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 194 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 417 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 58 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 180 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 223 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
ZNF770 1 dataset
ChIP HepG2 ENCFF233UVH 362 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap