chr17 : 6,101,658 6,102,354
696 bp 147 TFs 0 linked genes
This 696 bp open chromatin element has no linked target genes and is bound by 147 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:6,096,658 – 6,107,354
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
147 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_72h DE_72h-ALX3_MA0634.2 6 bp overlap
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 126 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 155 bp overlap
Ascl2 1 dataset
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
Atoh1 1 dataset
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 328 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 199 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 171 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 80 bp overlap
CTCF 1 dataset
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 204 bp overlap
CTCFL 1 dataset
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
DRGX 1 dataset
Motif DE_72h DE_72h-DRGX_MA1481.2 6 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dlx2 1 dataset
Motif DE_72h DE_72h-Dlx2_MA0885.3 8 bp overlap
Dlx5 1 dataset
Motif DE_72h DE_72h-Dlx5_MA1476.3 8 bp overlap
E2F3 1 dataset
Motif DE_72h DE_72h-E2F3_MA0469.4 14 bp overlap
EMX1 1 dataset
Motif DE_72h DE_72h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_72h DE_72h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_72h DE_72h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_72h DE_72h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 541 bp overlap
ESX1 1 dataset
Motif DE_72h DE_72h-ESX1_MA0644.3 7 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 229 bp overlap
EVX1 1 dataset
Motif DE_72h DE_72h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_72h DE_72h-EVX2_MA0888.2 6 bp overlap
EZH2 3 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 235 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 484 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 221 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 696 bp overlap
ChIP DE DE-FOXA2-2 641 bp overlap
FOXB1 1 dataset
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 696 bp overlap
ChIP DE DE-GATA4-2 696 bp overlap
ChIP foregut GSE117136.GATA4.foregut 555 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 397 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 544 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 696 bp overlap
ChIP DE DE-GATA6-2 643 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 645 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 696 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 679 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 669 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 696 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 679 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 598 bp overlap
ChIP foregut GSE117136.GATA6.foregut 537 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 426 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 333 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 494 bp overlap
GBX1 1 dataset
Motif DE_72h DE_72h-GBX1_MA0889.2 7 bp overlap
GSX1 1 dataset
Motif DE_72h DE_72h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_72h DE_72h-GSX2_MA0893.3 7 bp overlap
HAND2 1 dataset
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 439 bp overlap
HOXA1 1 dataset
Motif DE_72h DE_72h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_72h DE_72h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_72h DE_72h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_72h DE_72h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_72h DE_72h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_72h DE_72h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_72h DE_72h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_72h DE_72h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_72h DE_72h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_72h DE_72h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_72h DE_72h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_72h DE_72h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_72h DE_72h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_72h DE_72h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_72h DE_72h-HOXD8_MA0910.3 7 bp overlap
ISX 1 dataset
Motif DE_72h DE_72h-ISX_MA0654.2 6 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 558 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 400 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 585 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 662 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 411 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 566 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 388 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 581 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 601 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 141 bp overlap
LBX1 1 dataset
Motif DE_72h DE_72h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_72h DE_72h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_72h DE_72h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_72h DE_72h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_72h DE_72h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif DE_72h DE_72h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_72h DE_72h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_72h DE_72h-Lhx8_MA0705.2 6 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 211 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 316 bp overlap
MEOX1 1 dataset
Motif DE_72h DE_72h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_72h DE_72h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_72h DE_72h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_72h DE_72h-MNX1_MA0707.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 187 bp overlap
MYOG 1 dataset
Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap
Msgn1 1 dataset
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 113 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 551 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 225 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 164 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 590 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 516 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 571 bp overlap
ChIP hESC GSE18292.NANOG.hESC 181 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NHLH1 1 dataset
Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 225 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 208 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 360 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 235 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 226 bp overlap
NKX6-2 1 dataset
Motif DE_72h DE_72h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_72h DE_72h-NOTO_MA0710.2 7 bp overlap
Neurod2 2 datasets
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PAX4 1 dataset
Motif DE_72h DE_72h-PAX4_MA0068.2 8 bp overlap
PDX1 3 datasets
Motif DE_72h DE_72h-PDX1_MA0132.3 6 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 353 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 398 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 1 dataset
Motif DE_72h DE_72h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_72h DE_72h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_72h DE_72h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap
POU3F4 1 dataset
Motif DE_72h DE_72h-POU3F4_MA0789.1 9 bp overlap
POU5F1 8 datasets
Motif DE_72h DE_72h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 547 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 457 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 190 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 195 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 500 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 192 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 100 bp overlap
POU6F1 1 dataset
Motif DE_72h DE_72h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_72h DE_72h-POU6F2_MA0793.2 9 bp overlap
PROP1 1 dataset
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
PRRX1 1 dataset
Motif DE_72h DE_72h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_72h DE_72h-PRRX2_MA0075.4 7 bp overlap
Pax7 1 dataset
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
RAX2 1 dataset
Motif DE_72h DE_72h-RAX2_MA0717.2 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 186 bp overlap
RORB 1 dataset
Motif DE_72h DE_72h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_72h DE_72h-RORC_MA1151.2 10 bp overlap
RUNX3 1 dataset
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 86 bp overlap
SHOX 1 dataset
Motif DE_72h DE_72h-SHOX_MA0630.2 6 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 173 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 247 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 136 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 571 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 549 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 414 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 411 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 332 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 589 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 581 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 243 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 240 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 199 bp overlap
SMARCA4 3 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 591 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 598 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 462 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 363 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 266 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 495 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 233 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 588 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 218 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 561 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 348 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 589 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 375 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap
SS18 4 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 436 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 136 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 353 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 466 bp overlap
Shox2 1 dataset
Motif DE_72h DE_72h-Shox2_MA0720.2 6 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox5 1 dataset
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 381 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 328 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 366 bp overlap
TLX2 1 dataset
Motif DE_72h DE_72h-TLX2_MA1577.2 6 bp overlap
Tcf12 1 dataset
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
UNCX 1 dataset
Motif DE_72h DE_72h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_72h DE_72h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_72h DE_72h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_72h DE_72h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_72h DE_72h-VSX2_MA0726.2 7 bp overlap
ZFP14 1 dataset
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZNF382 1 dataset
Motif DE_72h DE_72h-ZNF382_MA1594.1 24 bp overlap
ZNF549 1 dataset
Motif DE_72h DE_72h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF770 1 dataset
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap