chr15 : 69,826,035 – 69,826,507
472 bp 95 TFs 1 linked gene
This 472 bp open chromatin element is linked to TLE3 and is bound by 95 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TLE3 271.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:69,821,035 – 69,831,507
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 295 bp overlap
Ascl2 1 dataset
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 400 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 182 bp overlap
BRD4 9 datasets
ChIP HEK293T GSE51633.BRD4.HEK293T 271 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 375 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 338 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 142 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 326 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 472 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 280 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 379 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 376 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 214 bp overlap
CTCF 1 dataset
Motif DE_72h DE_72h-CTCF_MA0139.2 15 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 202 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 296 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 157 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 277 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 163 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FLI1 5 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 299 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 303 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 299 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 278 bp overlap
ChIP SK-N-MC GSE61944.FLI1.SK-N-MC 271 bp overlap
FOS 1 dataset
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 177 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 321 bp overlap
ChIP DE DE-FOXA2-2 322 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 141 bp overlap
GATA1::TAL1 1 dataset
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 438 bp overlap
ChIP DE DE-GATA4-2 472 bp overlap
ChIP foregut GSE117136.GATA4.foregut 371 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 455 bp overlap
ChIP DE DE-GATA6-2 472 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 472 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 472 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 472 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 472 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 472 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 472 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 442 bp overlap
ChIP foregut GSE117136.GATA6.foregut 379 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 472 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 339 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 472 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 454 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 315 bp overlap
Hand1 1 dataset
Motif DE_72h DE_72h-Hand1_MA2123.1 9 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 350 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 243 bp overlap
IRF2 1 dataset
Motif DE_72h DE_72h-IRF2_MA0051.2 16 bp overlap
IRF2BP2 1 dataset
ChIP HEK293 GSE124636.IRF2BP2.HEK293 271 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 240 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 299 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 194 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 436 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 457 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 461 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 374 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 285 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 268 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 323 bp overlap
MSC 1 dataset
Motif DE_72h DE_72h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 265 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 138 bp overlap
MYCN 4 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 216 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 229 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 461 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 176 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 338 bp overlap
ChIP hESC GSE18292.NANOG.hESC 103 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 248 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 163 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 472 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCFF174WDB 70 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 460 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 82 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 182 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 437 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 469 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 319 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 329 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 330 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 454 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 431 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 278 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 247 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 232 bp overlap
SMARCA4 4 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 133 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 102 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 363 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 299 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 364 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 272 bp overlap
SMARCC1 7 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 131 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 330 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 225 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 285 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 174 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 343 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 288 bp overlap
SNAI1 1 dataset
Motif DE_72h DE_72h-SNAI1_MA1558.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 322 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 472 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 417 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 165 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 240 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 317 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 231 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 300 bp overlap
TCF12 1 dataset
Motif DE_72h DE_72h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
TP53 1 dataset
ChIP U2OS_UV_8H ERP004176.TP53.U2OS_UV_8H 164 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 154 bp overlap
YY1 7 datasets
ChIP HEK293 ENCFF734SBY 307 bp overlap
ChIP HEK293 ENCSR859RAO.YY1.HEK293 372 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 217 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 240 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 221 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 168 bp overlap
ChIP WA01 GSE39096.YY1.WA01 150 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 472 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 199 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 219 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 459 bp overlap
ZBTB7C 1 dataset
Motif DE_72h DE_72h-ZBTB7C_MA0695.2 8 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 367 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 323 bp overlap
ZEB1 2 datasets
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 208 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 429 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 375 bp overlap
ZIC1 1 dataset
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 472 bp overlap
ZIC4 1 dataset
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 250 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 121 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 220 bp overlap
ZNF320 1 dataset
ChIP HEK293 GSE76494.ZNF320.HEK293 171 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 227 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 372 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 177 bp overlap
ZNF423 3 datasets
ChIP HEK293 ENCFF937QHI 320 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 327 bp overlap
ChIP WTC11 ENCFF574PBR 203 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 82 bp overlap
ZNF518A 1 dataset
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 168 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 132 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 441 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 334 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 304 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 204 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 263 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 456 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 155 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 204 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 208 bp overlap
Zfx 1 dataset
Motif DE_72h DE_72h-Zfx_MA0146.3 10 bp overlap
Zic1::Zic2 1 dataset
Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap
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