chr15 : 69,299,995 69,300,395
400 bp 64 TFs 2 linked genes
This 400 bp open chromatin element is linked to PAQR5 and PAQR5-DT and is bound by 64 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PAQR5 1.0 kb Proximal Proximity
PAQR5-DT 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:69,294,995 – 69,305,395
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 347 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 243 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 297 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 156 bp overlap
BRD4 7 datasets
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 400 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 395 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 380 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 290 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 327 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 400 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 400 bp overlap
BRD7 1 dataset
ChIP SUM159PT_DMSO GSE131097.BRD7.SUM159PT_DMSO 342 bp overlap
CHD1 2 datasets
ChIP A-549 ENCSR398YBM.CHD1.A-549 111 bp overlap
ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 169 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 95 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 140 bp overlap
CTCF 20 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 161 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 317 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 319 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 124 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 139 bp overlap
ChIP A549 ENCFF034FVO 215 bp overlap
ChIP A549 ENCFF182TCQ 161 bp overlap
ChIP A549 ENCFF434LUY 167 bp overlap
ChIP A549 ENCFF669BWC 311 bp overlap
ChIP A549 ENCFF669BWC 379 bp overlap
ChIP H1 ENCFF414GZI 155 bp overlap
ChIP H1 ENCFF764RHO 166 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 81 bp overlap
ChIP HeLa-S3 ENCFF565UFR 151 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 148 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 397 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 225 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 168 bp overlap
ChIP astrocyte ENCFF558APA 244 bp overlap
ChIP endodermal cell ENCFF471YCZ 300 bp overlap
E2F6 2 datasets
ChIP A549 ENCFF550XVR 400 bp overlap
ChIP A549 ENCFF550XVR 198 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 225 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 238 bp overlap
ChIP MCF-7_estradiol_45min_H4 GSE99626.ESR1.MCF-7_estradiol_45min_H4 253 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 219 bp overlap
EZH2 10 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 220 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 400 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 106 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 50 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 319 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 91 bp overlap
ChIP hepatocyte ENCFF552DZB 165 bp overlap
ChIP keratinocyte ENCFF070STK 302 bp overlap
ChIP keratinocyte ENCFF070STK 400 bp overlap
ChIP neural progenitor cell ENCFF472NFV 400 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 114 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 193 bp overlap
ChIP DE DE-GATA4-2 212 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 254 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 245 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 346 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 185 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 97 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 338 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 268 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 61 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 192 bp overlap
ChIP foregut GSE117136.GATA6.foregut 199 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 152 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 375 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 395 bp overlap
GTF2F1 1 dataset
ChIP HeLa-S3 ENCFF868VGE 377 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 382 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 291 bp overlap
JUN 2 datasets
ChIP A549 ENCFF191QZG 400 bp overlap
ChIP A549 ENCFF191QZG 395 bp overlap
KAT2B 1 dataset
ChIP A-549 ENCSR356WVQ.KAT2B.A-549 202 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 203 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 125 bp overlap
MAX 3 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 328 bp overlap
ChIP A549 ENCFF310XGQ 171 bp overlap
ChIP H1 ENCFF914VQY 244 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 314 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 242 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 137 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 400 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 243 bp overlap
POLR2A 9 datasets
ChIP adrenal gland ENCFF843OBJ 270 bp overlap
ChIP body of pancreas ENCFF501FEC 213 bp overlap
ChIP body of pancreas ENCFF675RCN 232 bp overlap
ChIP body of pancreas ENCFF727UBE 266 bp overlap
ChIP stomach ENCFF607ZPU 96 bp overlap
ChIP stomach ENCFF820WZN 157 bp overlap
ChIP transverse colon ENCFF193UMS 358 bp overlap
ChIP transverse colon ENCFF607LKE 235 bp overlap
ChIP transverse colon ENCFF610RWV 239 bp overlap
RAD21 5 datasets
ChIP A549 ENCFF264AHX 303 bp overlap
ChIP A549 ENCFF264AHX 254 bp overlap
ChIP HeLa-S3 ENCFF775CHI 187 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 395 bp overlap
ChIP MDM GSE103477.RAD21.MDM 106 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 157 bp overlap
RBM39 2 datasets
ChIP K-562 ENCSR764OXF.RBM39.K-562 238 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 170 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 210 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 298 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 152 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 208 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 400 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 400 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 99 bp overlap
SMC3 5 datasets
ChIP A-549 ENCSR481YWD.SMC3.A-549 112 bp overlap
ChIP A549 ENCFF747SCJ 152 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 156 bp overlap
ChIP HeLa-S3 ENCFF992MML 152 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 115 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 393 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 131 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 183 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 204 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 139 bp overlap
SPI1 1 dataset
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 149 bp overlap
SUZ12 3 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 96 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 117 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 270 bp overlap
TBP 2 datasets
ChIP HeLa-S3 ENCFF715NNJ 216 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 77 bp overlap
TCF7L2 1 dataset
ChIP HeLa-S3 ENCFF673QAB 338 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 311 bp overlap
USF2 1 dataset
ChIP HeLa-S3 ENCFF765YUZ 74 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 182 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 274 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 309 bp overlap
ZBTB48 3 datasets
ChIP HEK293 ENCFF809BPK 167 bp overlap
ChIP HEK293 ENCFF809BPK 106 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 341 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 210 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 167 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 282 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 232 bp overlap
ZNF512 3 datasets
ChIP HepG2 ENCFF113IGR 140 bp overlap
ChIP K-562 ENCSR591CCL.ZNF512.K-562 72 bp overlap
ChIP WTC11 ENCFF086TTM 204 bp overlap
ZNF512B 2 datasets
ChIP MCF-7 ENCSR761LRR.ZNF512B.MCF-7 180 bp overlap
ChIP MCF-7 ENCSR555DCF.ZNF512B.MCF-7 58 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 126 bp overlap