chr13 : 72,851,502 – 72,851,880

378 bp 97 TFs 0 linked genes

This 378 bp open chromatin element has no linked target genes and is bound by 97 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

97 transcription factors

AR 1 dataset

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 239 bp overlap

ASCL1 2 datasets

Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 7 datasets

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 159 bp overlap

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 378 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 192 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 378 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 175 bp overlap

ChIP SEM GSE83671.BRD4.SEM 240 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 190 bp overlap

Bhlha15 1 dataset

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

CDX2 1 dataset

ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 205 bp overlap

CTCF 1 dataset

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 59 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 332 bp overlap

ChIP BLaER1 ENCFF460KDD 193 bp overlap

ERG 1 dataset

ChIP SEM GSE117864.ERG.SEM 239 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

GATA2 2 datasets

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 378 bp overlap

ChIP SKH1 GSE87283.GATA2.SKH1 178 bp overlap

GATA3 3 datasets

ChIP Jurkat GSE76181.GATA3.Jurkat 148 bp overlap

ChIP Jurkat GSE120063.GATA3.Jurkat 115 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 123 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 378 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 104 bp overlap

HNF4A 7 datasets

Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap

ChIP GP5D GSE51234.HNF4A.GP5D 194 bp overlap

ChIP IM95 GSE114018.HNF4A.IM95 151 bp overlap

ChIP KATO-III GSE114018.HNF4A.KATO-III 378 bp overlap

ChIP liver ENCFF354NRH 127 bp overlap

ChIP liver ENCFF449HPV 90 bp overlap

ChIP liver ERP002306.HNF4A.liver 111 bp overlap

HNRNPL 4 datasets

ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 126 bp overlap

ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 126 bp overlap

ChIP HepG2 ENCFF671UYF 238 bp overlap

ChIP HepG2 ENCFF684GAM 238 bp overlap

JUND 1 dataset

ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 53 bp overlap

KDM1A 1 dataset

ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 203 bp overlap

KLF5 1 dataset

ChIP KATO-III GSE51705.KLF5.KATO-III 332 bp overlap

MAX 1 dataset

ChIP liver ENCFF584QGB 158 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MTA1 1 dataset

ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 117 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 67 bp overlap

MXI1 1 dataset

ChIP SK-N-SH ENCFF746HVJ 327 bp overlap

MYC 2 datasets

ChIP GP5D GSE51234.MYC.GP5D 115 bp overlap

ChIP NB69 GSE138295.MYC.NB69 90 bp overlap

MYCN 4 datasets

ChIP BE2C GSE80151.MYCN.BE2C 254 bp overlap

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 227 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 237 bp overlap

ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 254 bp overlap

MYF5 1 dataset

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

MYOD1 1 dataset

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 108 bp overlap

NEUROD1 1 dataset

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIB 1 dataset

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

NIPBL 1 dataset

ChIP GP5D GSE51234.NIPBL.GP5D 63 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap

NR4A1 1 dataset

Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nr2f6 1 dataset

Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PAX5 1 dataset

ChIP NALM-6 GSE126300.PAX5.NALM-6 253 bp overlap

PCBP1 2 datasets

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 126 bp overlap

ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 122 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 291 bp overlap

POLR2A 1 dataset

ChIP right lobe of liver ENCFF026NCK 205 bp overlap

POLR2G 1 dataset

ChIP K562 ENCFF047BLG 251 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 76 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 100 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

RAD21 1 dataset

ChIP GP5D GSE51234.RAD21.GP5D 169 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 128 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 141 bp overlap

REST 1 dataset

ChIP liver ENCFF240FWT 322 bp overlap

RUNX1 2 datasets

ChIP NALM-6 GSE126300.RUNX1.NALM-6 378 bp overlap

ChIP NALM-6 GSE109377.RUNX1.NALM-6 122 bp overlap

RUNX1T1 2 datasets

ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 188 bp overlap

ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 159 bp overlap

RXRA 1 dataset

ChIP liver ENCFF807CIA 108 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap

SALL2 1 dataset

ChIP HEK293 GSE145940.SALL2.HEK293 186 bp overlap

SMARCA4 2 datasets

ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 198 bp overlap

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 218 bp overlap

SMC3 1 dataset

ChIP GP5D GSE51234.SMC3.GP5D 74 bp overlap

SNAI1 1 dataset

Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 201 bp overlap

SP1 2 datasets

ChIP liver ENCFF597LFJ 91 bp overlap

ChIP liver ENCFF769YSM 271 bp overlap

SPI1 1 dataset

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 153 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 247 bp overlap

SREBP2 1 dataset

ChIP HCC70 GSE126380.SREBP2.HCC70 141 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 160 bp overlap

TAL1::TCF3 1 dataset

Motif DE_12h DE_12h-TAL1TCF3_MA0091.2 10 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 162 bp overlap

TCF12 1 dataset

Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap

TCF3 3 datasets

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 156 bp overlap

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 304 bp overlap

TCF4 1 dataset

Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 208 bp overlap

TFAP4 1 dataset

Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap

TP63 2 datasets

ChIP breast-organoid GSE113909.TP63.breast-organoid 97 bp overlap

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 68 bp overlap

TRIM28 1 dataset

ChIP AF22 GSE84259.TRIM28.AF22 115 bp overlap

TWIST1 2 datasets

ChIP BE2C GSE80151.TWIST1.BE2C 372 bp overlap

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 372 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

Tfcp2l1 1 dataset

Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

VDR 1 dataset

ChIP kidney-cortex GSE129585.VDR.kidney-cortex 313 bp overlap

YY1 1 dataset

ChIP liver ENCFF400MBC 306 bp overlap

YY2 1 dataset

Motif DE_12h DE_12h-YY2_MA0748.3 7 bp overlap

ZBTB33 3 datasets

ChIP HepG2 ENCFF778UKV 237 bp overlap

ChIP liver ENCFF592BJA 250 bp overlap

ChIP liver ENCSR516HUP.ZBTB33.liver 107 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF138 2 datasets

ChIP WTC11 ENCFF800FUU 121 bp overlap

ChIP WTC11 ENCFF800FUU 327 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF417 1 dataset

Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap

ZNF550 1 dataset

ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 325 bp overlap

ZNF572 1 dataset

ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 118 bp overlap

ZNF768 1 dataset

ChIP HepG2 ENCFF388QCK 98 bp overlap

ZNF816 1 dataset

Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap

Zfp961 1 dataset

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap