chr13 : 61,608,061 – 61,608,555

494 bp 75 TFs 0 linked genes

This 494 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

75 transcription factors

AR 1 dataset

ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 201 bp overlap

BRD4 1 dataset

ChIP MV4-11_IBET151_5000nM GSE120715.BRD4.MV4-11_IBET151_5000nM 213 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 310 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 339 bp overlap

ChIP BLaER1 ENCFF364PUR 197 bp overlap

ELF1 2 datasets

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 347 bp overlap

FOXO1::ELF1 2 datasets

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

Motif ES_0h ES_0h-FOXO1ELF1_MA1953.2 13 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 261 bp overlap

HSF1 2 datasets

Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap

Motif ES_0h ES_0h-HSF1_MA0486.2 13 bp overlap

HSF2 2 datasets

Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap

Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap

HSF4 2 datasets

Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap

Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap

Hand1::Tcf3 2 datasets

Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap

Motif ES_0h ES_0h-Hand1Tcf3_MA0092.2 9 bp overlap

IKZF2 2 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 2 datasets

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap

KLF14 2 datasets

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap

KLF16 2 datasets

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap

KLF5 2 datasets

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap

MAZ 2 datasets

Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap

Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 327 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 185 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 193 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 390 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 328 bp overlap

ChIP hESC GSE18292.NANOG.hESC 140 bp overlap

NEUROD1 2 datasets

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 156 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 151 bp overlap

Nkx3-2 1 dataset

Motif ES_0h ES_0h-Nkx3-2_MA0122.4 10 bp overlap

OSR2 4 datasets

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap

PAX3 1 dataset

Motif ES_0h ES_0h-PAX3_MA1546.2 14 bp overlap

PBX3 1 dataset

Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap

POU2F1 1 dataset

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU3F1 1 dataset

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU4F3 1 dataset

Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap

POU5F1 4 datasets

ChIP BG03 GSE21614.POU5F1.BG03 191 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 346 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 288 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 203 bp overlap

POU5F1B 1 dataset

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm15 1 dataset

Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap

Prdm4 2 datasets

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap

REST 1 dataset

Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap

SIX1 1 dataset

Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap

SOX13 1 dataset

Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap

SOX2 3 datasets

Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap

ChIP hESC GSE18292.SOX2.hESC 106 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 291 bp overlap

SP1 1 dataset

ChIP H1 ENCFF263FUH 281 bp overlap

SP3 2 datasets

Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap

Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap

SP4 2 datasets

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

Six4 1 dataset

Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap

Sox17 1 dataset

Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap

Sox3 1 dataset

Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap

Sox5 1 dataset

Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap

Sox6 1 dataset

Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap

Spi1 2 datasets

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap

TEAD1 2 datasets

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap

TEAD2 2 datasets

Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap

Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap

TEAD3 2 datasets

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap

TEAD4 4 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

ChIP ESC S26-ESC-d0-TEAD4-exp1 312 bp overlap

Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 279 bp overlap

TRIM28 2 datasets

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 382 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 265 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 151 bp overlap

ZBTB26 2 datasets

Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap

Motif ES_0h ES_0h-ZBTB26_MA1579.2 8 bp overlap

ZFP14 2 datasets

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 294 bp overlap

ZNF148 2 datasets

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap

ZNF184 1 dataset

Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap

ZNF24 1 dataset

Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap

ZNF417 2 datasets

Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap

Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap

ZNF418 1 dataset

Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 260 bp overlap

ZNF675 2 datasets

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap

ZNF680 2 datasets

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap

Zfp961 2 datasets

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap

Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap

Zfx 2 datasets

Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap

Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap