chr12 : 25,488,979 – 25,489,708
729 bp 92 TFs 0 linked genes
This 729 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:25,483,979 – 25,494,708
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 60 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 92 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 57 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 223 bp overlap
BRD4 15 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 128 bp overlap
ChIP K-562 ENCSR583ACG.BRD4.K-562 71 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 63 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 127 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 57 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 140 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 139 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 138 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 130 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 146 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 140 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 105 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 102 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 74 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 113 bp overlap
CEBPB 3 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 72 bp overlap
ChIP MCF-7 ENCFF772ZTQ 178 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 89 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 270 bp overlap
EGR1 1 dataset
Motif DE_24h DE_24h-EGR1_MA0162.5 10 bp overlap
EGR2 1 dataset
Motif DE_24h DE_24h-EGR2_MA0472.2 11 bp overlap
EGR3 1 dataset
Motif DE_24h DE_24h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_24h DE_24h-EGR4_MA0733.2 11 bp overlap
FOXA1 11 datasets
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 61 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
Motif DE_24h DE_24h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF361KNY 285 bp overlap
ChIP HepG2 ENCFF740VZW 97 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 202 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 164 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 78 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 59 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 53 bp overlap
FOXA2 4 datasets
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif DE_24h DE_24h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP HepG2 ENCFF894AYY 159 bp overlap
FOXA3 3 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
Motif DE_24h DE_24h-FOXA3_MA1683.2 7 bp overlap
ChIP HepG2 ENCFF005KGL 360 bp overlap
FOXB1 2 datasets
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Motif DE_24h DE_24h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap
FOXD1 2 datasets
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
Motif DE_24h DE_24h-FOXD1_MA0031.2 7 bp overlap
FOXD2 2 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap
FOXD3 2 datasets
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Motif DE_24h DE_24h-FOXD3_MA0041.3 14 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
FOXF2 2 datasets
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
Motif DE_24h DE_24h-FOXF2_MA0030.2 9 bp overlap
FOXG1 2 datasets
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
Motif DE_24h DE_24h-FOXG1_MA0613.1 8 bp overlap
FOXI1 2 datasets
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
Motif DE_24h DE_24h-FOXI1_MA0042.2 7 bp overlap
FOXK1 2 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif DE_24h DE_24h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif DE_24h DE_24h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif DE_24h DE_24h-FOXL1_MA0033.2 7 bp overlap
FOXN3 2 datasets
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif DE_24h DE_24h-FOXN3_MA1489.1 8 bp overlap
FOXO4 2 datasets
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif DE_24h DE_24h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif DE_24h DE_24h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
Motif DE_24h DE_24h-FOXP1_MA0481.4 7 bp overlap
FOXP2 2 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif DE_24h DE_24h-FOXP2_MA0593.2 9 bp overlap
FOXP3 2 datasets
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif DE_24h DE_24h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
Motif DE_24h DE_24h-FOXP4_MA2117.1 7 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif DE_24h DE_24h-FOXS1_MA2118.1 8 bp overlap
Foxf1 2 datasets
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif DE_24h DE_24h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Motif DE_24h DE_24h-Foxj2_MA0614.1 8 bp overlap
Foxj3 2 datasets
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Motif DE_24h DE_24h-Foxj3_MA0851.2 9 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_24h DE_24h-Foxl2_MA1607.2 10 bp overlap
Foxo1 2 datasets
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif DE_24h DE_24h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif DE_24h DE_24h-Foxo3_MA0157.4 7 bp overlap
HOXB13 8 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 69 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 87 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 93 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 96 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 156 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 52 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 59 bp overlap
ChIP prostate_P7 GSE130408.HOXB13.prostate_P7 57 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 202 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
MAF 1 dataset
Motif DE_24h DE_24h-MAF_MA1520.2 13 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED1 2 datasets
ChIP VCaP GSE148358.MED1.VCaP 113 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 104 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 343 bp overlap
NFRKB 2 datasets
ChIP K-562 ENCSR657EOF.NFRKB.K-562 57 bp overlap
ChIP K562 ENCFF057YFW 324 bp overlap
NRF1 2 datasets
ChIP K562 ENCFF689EWI 485 bp overlap
ChIP K562 ENCFF791UHF 354 bp overlap
Nanog 1 dataset
Motif DE_24h DE_24h-Nanog_MA2339.1 7 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 491 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 187 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 125 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 163 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 163 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 196 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_24h DE_24h-SOX10_MA0442.3 6 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif DE_24h DE_24h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif DE_24h DE_24h-Sox11_MA0869.3 8 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 109 bp overlap
ChIP hESC GSE122298.TBP.hESC 92 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
THAP1 1 dataset
Motif DE_24h DE_24h-THAP1_MA0597.3 8 bp overlap
VDR 1 dataset
ChIP primary-prostate-epithelial-cell GSE124576.VDR.primary-prostate-epithelial-cell 189 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 10 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP H1 ENCFF524BTL 208 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 256 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 146 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 133 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ChIP K562 ENCFF660QRE 218 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 136 bp overlap
ChIP NT2/D1 ENCFF999MII 195 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 152 bp overlap
YY2 1 dataset
Motif DE_12h DE_12h-YY2_MA0748.3 7 bp overlap
ZKSCAN3 2 datasets
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_24h DE_24h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF135 1 dataset
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
ZNF148 5 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ChIP K-562 ENCSR018MSO.ZNF148.K-562 207 bp overlap
ChIP K562 ENCFF352SDL 518 bp overlap
ChIP K562 ENCFF352SDL 621 bp overlap
ChIP K562 ENCFF352SDL 388 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ChIP HepG2 ENCFF585QNU 82 bp overlap
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF316 1 dataset
ChIP K-562 ENCSR200JYP.ZNF316.K-562 67 bp overlap
ZNF343 2 datasets
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
Motif DE_24h DE_24h-ZNF343_MA1711.2 16 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 169 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif DE_24h DE_24h-ZNF582_MA1983.2 19 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF707 1 dataset
Motif DE_24h DE_24h-ZNF707_MA1715.1 15 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
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