chr11 : 130,378,066 130,378,569
503 bp 64 TFs 4 linked genes
This 503 bp open chromatin element is linked to 4 target genes and is bound by 64 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
ADAMTS8 50.2 kb Distal Multiome
ZBTB44-DT 63.4 kb Distal Multiome
ZBTB44 63.5 kb Distal Multiome
ST14 218.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:130,373,066 – 130,383,569
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 503 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 503 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 477 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 277 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 191 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 211 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 235 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 310 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 107 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 503 bp overlap
ChIP H1 ENCFF126NLU 332 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 278 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 187 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 317 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 302 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 159 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 169 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 277 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 257 bp overlap
ChIP hESC GSE17917.EP300.hESC 443 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 131 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 221 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 188 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 131 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 196 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 123 bp overlap
EZH2 1 dataset
ChIP SF8628 GSE94834.EZH2.SF8628 298 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 381 bp overlap
ChIP DE DE-FOXA2-2 425 bp overlap
FOXJ3 1 dataset
ChIP WTC11 ENCFF909BTK 325 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 306 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 203 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 288 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 133 bp overlap
GATA2 3 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 152 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 89 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 205 bp overlap
GATA3 2 datasets
ChIP MCF-7 GSE122847.GATA3.MCF-7 189 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 130 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 424 bp overlap
ChIP DE DE-GATA4-2 503 bp overlap
ChIP foregut GSE117136.GATA4.foregut 466 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 190 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 159 bp overlap
ChIP DE DE-GATA6-1 497 bp overlap
ChIP DE DE-GATA6-2 503 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 503 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 503 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 483 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 503 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 503 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 486 bp overlap
ChIP foregut GSE117136.GATA6.foregut 420 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 337 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 404 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 240 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 132 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 309 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 65 bp overlap
JUN 5 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 291 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 375 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 296 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 371 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 297 bp overlap
KLF4 3 datasets
ChIP WA09 GSE105028.KLF4.WA09 333 bp overlap
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 297 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 336 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 256 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 206 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 319 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 122 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 296 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 503 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 503 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 237 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 503 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 503 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 503 bp overlap
ChIP hESC GSE18292.NANOG.hESC 263 bp overlap
ChIP hESC GSE20650.NANOG.hESC 168 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 248 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 216 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 240 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 245 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 119 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 211 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 315 bp overlap
ChIP H1 ENCFF566JSR 374 bp overlap
ChIP H1 ENCFF833NJP 274 bp overlap
POU5F1 13 datasets
ChIP BG03 GSE21614.POU5F1.BG03 165 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 462 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 503 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 55 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 375 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 145 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 341 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 331 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 304 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 503 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 490 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 327 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 376 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 136 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 320 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 58 bp overlap
SMAD2 3 datasets
ChIP hESC GSE29422.SMAD2.hESC 175 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 499 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 356 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 503 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 502 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 478 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 362 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 503 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 503 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 503 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 458 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 332 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 265 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 214 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 442 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 316 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 385 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 426 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 299 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 288 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 320 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 360 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 394 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 217 bp overlap
ChIP hESC GSE69479.SOX2.hESC 267 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 336 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 307 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 293 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 246 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 273 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 200 bp overlap
ChIP hESC GSE122298.TBP.hESC 162 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 121 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 324 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 499 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 395 bp overlap
TEAD4 4 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 248 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 382 bp overlap
ChIP H1 ENCFF778PAX 225 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 297 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 145 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 362 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 261 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 259 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 255 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 238 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 189 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 238 bp overlap