chr11 : 102,253,478 102,253,996
518 bp 98 TFs 0 linked genes
This 518 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:102,248,478 – 102,258,996
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa GSE40632.AFF4.HeLa 184 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 124 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 278 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 185 bp overlap
BRD4 1 dataset
ChIP keratinocyte GSE140992.BRD4.keratinocyte 518 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 207 bp overlap
CTCF 25 datasets
ChIP CD14-positive monocyte ENCFF087XLR 174 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 262 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 274 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 251 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 88 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 168 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 211 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 375 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 51 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 199 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 108 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 177 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 62 bp overlap
ChIP adrenal gland ENCFF886WNR 61 bp overlap
ChIP endothelial cell ENCFF663LIE 75 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 175 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 164 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 367 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 121 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 168 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 61 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 146 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 246 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 87 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 306 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF886KFV 239 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 325 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 207 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 330 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 321 bp overlap
ERF::NHLH1 2 datasets
Motif DE_36h DE_36h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_48h DE_48h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ESRRA 2 datasets
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
Motif DE_48h DE_48h-ESRRA_MA0592.4 9 bp overlap
FOXL2 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 182 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 115 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 116 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA2 2 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 138 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 113 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 518 bp overlap
ChIP DE DE-GATA4-2 518 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 274 bp overlap
ChIP foregut GSE117136.GATA4.foregut 345 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 474 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 315 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 141 bp overlap
ChIP DE DE-GATA6-1 518 bp overlap
ChIP DE DE-GATA6-2 518 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 518 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 518 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 493 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 518 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 518 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 493 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 347 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 434 bp overlap
ChIP foregut GSE117136.GATA6.foregut 292 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 313 bp overlap
GLI3 2 datasets
Motif DE_36h DE_36h-GLI3_MA1491.3 15 bp overlap
Motif DE_48h DE_48h-GLI3_MA1491.3 15 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Gli1 2 datasets
Motif DE_36h DE_36h-Gli1_MA1990.2 10 bp overlap
Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_36h DE_36h-Gli2_MA0734.4 9 bp overlap
Motif DE_48h DE_48h-Gli2_MA0734.4 9 bp overlap
HEY2 2 datasets
Motif DE_36h DE_36h-HEY2_MA0649.2 9 bp overlap
Motif DE_48h DE_48h-HEY2_MA0649.2 9 bp overlap
HIF1A 2 datasets
Motif DE_36h DE_36h-HIF1A_MA1106.2 6 bp overlap
Motif DE_48h DE_48h-HIF1A_MA1106.2 6 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 66 bp overlap
Hand1 2 datasets
Motif DE_36h DE_36h-Hand1_MA2123.1 9 bp overlap
Motif DE_48h DE_48h-Hand1_MA2123.1 9 bp overlap
IKZF1 3 datasets
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 333 bp overlap
ChIP K562 ENCFF348IBL 503 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 190 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 255 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 192 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 167 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 236 bp overlap
KLF4 2 datasets
ChIP PDAC GSE64557.KLF4.PDAC 59 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 184 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 168 bp overlap
MAX 2 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 257 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 155 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 163 bp overlap
MYOG 1 dataset
Motif DE_36h DE_36h-MYOG_MA0500.3 8 bp overlap
Mecom 3 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 220 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 109 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 232 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 157 bp overlap
NHLH1 1 dataset
Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap
NKX2-5 1 dataset
Motif DE_36h DE_36h-NKX2-5_MA0063.3 7 bp overlap
Nr5A2 2 datasets
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 105 bp overlap
PBX3 3 datasets
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 116 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 159 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 133 bp overlap
PKNOX1 2 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF305NWS 61 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 141 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 421 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 190 bp overlap
RAD21 4 datasets
ChIP HCT116 ENCFF568PEO 311 bp overlap
ChIP HeLa-S3 ENCFF775CHI 228 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 215 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
RCOR1 1 dataset
ChIP HeLa-S3 ENCSR000ECM.RCOR1.HeLa-S3 130 bp overlap
RELA 1 dataset
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 144 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 137 bp overlap
ChIP HGrC1_C134W-TGF_SMAD4-KO GSE138496.SMAD2-3.HGrC1_C134W-TGF_SMAD4-KO 118 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 203 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 368 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 405 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 219 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 80 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S10-DE-d1-BAF155-exp1 236 bp overlap
SMC3 6 datasets
ChIP HeLa GSE126990.SMC3.HeLa 176 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 176 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 176 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 183 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 163 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 163 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 171 bp overlap
SPIC 1 dataset
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 242 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 242 bp overlap
STAG2 1 dataset
ChIP MCF-10A GSE101921.STAG2.MCF-10A 163 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 184 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Spz1 3 datasets
Motif DE_36h DE_36h-Spz1_MA0111.1 11 bp overlap
Motif DE_48h DE_48h-Spz1_MA0111.1 11 bp overlap
Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TCF7L1 3 datasets
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
ChIP HeLa-S3 ENCFF673QAB 327 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 155 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 178 bp overlap
THAP1 2 datasets
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 2 datasets
Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_48h DE_48h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
ZNF319 2 datasets
ChIP K-562 ENCSR231PDA.ZNF319.K-562 79 bp overlap
ChIP K562 ENCFF561ZSB 89 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 100 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 212 bp overlap
ZNF692 3 datasets
Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap
Motif DE_48h DE_48h-ZNF692_MA1986.2 8 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 147 bp overlap
Zfp335 2 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap