chr1 : 196,143,934 – 196,144,233
299 bp 73 TFs 0 linked genes
This 299 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:196,138,934 – 196,149,233
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 107 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
ATF3 6 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 233 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 137 bp overlap
ChIP liver ENCFF375GID 299 bp overlap
ChIP liver ENCFF867MFZ 299 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 267 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 247 bp overlap
ATF4 7 datasets
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
ChIP HepG2 ENCFF903ADR 299 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 299 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 279 bp overlap
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_cDNA 148 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 299 bp overlap
ChIP K562 ENCFF674KTF 253 bp overlap
BATF 1 dataset
ChIP BC-3 GSE132777.BATF.BC-3 217 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 106 bp overlap
BRD4 5 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 231 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 211 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 194 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 299 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 204 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 129 bp overlap
CEBPA 2 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 299 bp overlap
ChIP liver ERP002306.CEBPA.liver 264 bp overlap
CEBPB 5 datasets
ChIP H1 ENCFF871PTR 244 bp overlap
ChIP HCT116 ENCFF097OLY 299 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 118 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 150 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 212 bp overlap
CEBPG 4 datasets
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
ChIP HepG2 ENCFF503XBC 279 bp overlap
ChIP K-562 ENCSR620VIC.CEBPG.K-562 248 bp overlap
ChIP K562 ENCFF783ADE 299 bp overlap
CTCF 306 datasets
ChIP 22Rv1 ENCFF466OXN 299 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 299 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 299 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 227 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 143 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 282 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 270 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 153 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 162 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 293 bp overlap
ChIP A549 ENCFF034FVO 230 bp overlap
ChIP A673 ENCFF123WOM 149 bp overlap
ChIP AG04450 ENCFF116DJL 209 bp overlap
ChIP AG09309 ENCFF478XPS 204 bp overlap
ChIP ASC GSE21366.CTCF.ASC 138 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 160 bp overlap
ChIP BE2C ENCFF757SRF 140 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 266 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 131 bp overlap
ChIP C4-2B ENCFF821XVN 250 bp overlap
ChIP C4-2B ENCFF821XVN 246 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 130 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 188 bp overlap
ChIP D721Med ENCFF513FYD 177 bp overlap
ChIP DND-41 ENCFF913MRA 238 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 135 bp overlap
ChIP DOHH2 ENCFF637WNW 178 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 299 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 130 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 225 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 218 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 197 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 155 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 161 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 175 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 190 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 111 bp overlap
ChIP GM12865 ENCFF067GFI 172 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 128 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 122 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 160 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 108 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 197 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 132 bp overlap
ChIP GM12872 ENCFF697BYI 236 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 161 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 127 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 124 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 138 bp overlap
ChIP GM12878 ENCFF635MMB 198 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 182 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 150 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 111 bp overlap
ChIP GM23338 ENCFF531QOI 188 bp overlap
ChIP GM23338 ENCFF772DML 138 bp overlap
ChIP GM23338 ENCFF832KWE 299 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 299 bp overlap
ChIP H1 ENCFF414GZI 174 bp overlap
ChIP H1 ENCFF764RHO 215 bp overlap
ChIP H54 ENCFF255TVO 206 bp overlap
ChIP H9 ENCFF152GTF 205 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 184 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 165 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 234 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 190 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 185 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 210 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 117 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 159 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 160 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 181 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 143 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 299 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 247 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 143 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 299 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 299 bp overlap
ChIP HCT116 ENCFF003KHP 286 bp overlap
ChIP HCT116 ENCFF209YMI 198 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 123 bp overlap
ChIP HEK293 ENCFF498RMM 225 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 154 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 199 bp overlap
ChIP HFF-Myc ENCFF680WYR 255 bp overlap
ChIP HFFc6 ENCFF005CJI 154 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 154 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 177 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 202 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 193 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 207 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 140 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 140 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 85 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 198 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 179 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 204 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 299 bp overlap
ChIP HeLa-S3 ENCFF565UFR 148 bp overlap
ChIP HeLa-S3 ENCFF626XQK 184 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 209 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 122 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 213 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 240 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 140 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 148 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 173 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 154 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 139 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 124 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 132 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 105 bp overlap
ChIP HepG2 ENCFF127KUP 196 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 116 bp overlap
ChIP IMR-90 ENCFF887MRH 172 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 115 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 182 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 176 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 149 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 128 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 129 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 107 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 112 bp overlap
ChIP K-562_CRISPRk_N4293 GSE131349.CTCF.K-562_CRISPRk_N4293 101 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 286 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 101 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 124 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 270 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 148 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 151 bp overlap
ChIP K562 ENCFF082GOI 175 bp overlap
ChIP K562 ENCFF400DFR 211 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 244 bp overlap
ChIP KMS-11_NSD2-Low GSE131651.CTCF.KMS-11_NSD2-Low 144 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 177 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 187 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 228 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 153 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 212 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 275 bp overlap
ChIP Loucy ENCFF359TVQ 177 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 299 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 206 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 216 bp overlap
ChIP MCF-7 ENCFF139NQI 209 bp overlap
ChIP MCF-7 ENCFF162GNE 190 bp overlap
ChIP MCF-7 ENCFF198DQX 192 bp overlap
ChIP MCF-7 ENCFF210JUZ 124 bp overlap
ChIP MCF-7 ENCFF494VXA 192 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 238 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 194 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 191 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 177 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 189 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 167 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 145 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 202 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 255 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 242 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 190 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 241 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 158 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 191 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 154 bp overlap
ChIP NB4 ENCFF155DNY 174 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 178 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 230 bp overlap
ChIP NCI-H929 ENCFF305JAB 157 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 299 bp overlap
ChIP OCI-LY1 ENCFF455ESK 106 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 200 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 146 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 107 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 255 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 299 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 299 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 187 bp overlap
ChIP PC-3 ENCFF487TUI 199 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 299 bp overlap
ChIP Panc1 ENCFF056JQX 276 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 273 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 133 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 164 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 129 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 242 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 299 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 136 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 299 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 248 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 175 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 235 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 299 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 264 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 267 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 152 bp overlap
ChIP TALL-1_Pat1 GSE130140.CTCF.TALL-1_Pat1 153 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 166 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 143 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 299 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 173 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 167 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 159 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 168 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 175 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 97 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 299 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 173 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 197 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 93 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 169 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 150 bp overlap
ChIP VCaP ENCFF858YQT 299 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 274 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 130 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 186 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 190 bp overlap
ChIP WA09 GSE105028.CTCF.WA09 147 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 214 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 113 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 157 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 226 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 132 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 165 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 110 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 228 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 162 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 215 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 165 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 121 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 237 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 272 bp overlap
ChIP endodermal cell ENCFF471YCZ 193 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 160 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 167 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 151 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 116 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 181 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 227 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 186 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 194 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 170 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 135 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 213 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 60 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 163 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 115 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 149 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 292 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 299 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 184 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 185 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 114 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 231 bp overlap
ChIP hepatocyte ENCFF263BLJ 224 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 215 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 201 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 221 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 176 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 142 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 165 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 187 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 156 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 160 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 228 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 212 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 267 bp overlap
ChIP keratinocyte ENCFF667ULX 227 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 299 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 183 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 152 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 224 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 176 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 210 bp overlap
ChIP liver ENCFF895ERR 211 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 180 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 251 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 176 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 118 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 162 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 148 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 299 bp overlap
ChIP neural crest cell ENCFF182LWK 297 bp overlap
ChIP neural crest cell ENCFF182LWK 91 bp overlap
ChIP neural progenitor cell ENCFF420RBO 138 bp overlap
ChIP neural progenitor cell ENCFF581WPG 299 bp overlap
ChIP neural progenitor cell ENCFF581WPG 90 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 194 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 218 bp overlap
ChIP osteoblast ENCFF491ZJZ 278 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 192 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 187 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 149 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 267 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 299 bp overlap
ChIP right lobe of liver ENCFF011NDG 197 bp overlap
ChIP right lobe of liver ENCFF250KSY 293 bp overlap
ChIP right lobe of liver ENCFF523SCB 144 bp overlap
ChIP right lobe of liver ENCFF956UTA 268 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 295 bp overlap
CTCFL 8 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
ChIP FT282 GSE131931.CTCFL.FT282 110 bp overlap
ChIP K-562 ENCSR000BNK.CTCFL.K-562 142 bp overlap
ChIP K562 ENCFF883NXC 139 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 171 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 236 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 228 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 178 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 226 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Ddit3::Cebpa 1 dataset
Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 221 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 189 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 202 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 193 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 190 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 200 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 187 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 180 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 185 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 185 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 171 bp overlap
EZH2 1 dataset
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 102 bp overlap
FOXA1 4 datasets
ChIP ZR751 GSE72249.FOXA1.ZR751 68 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 164 bp overlap
ChIP liver ENCFF749ERP 195 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 132 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GABPB1 1 dataset
ChIP WTC11 ENCFF166QKI 299 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 57 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 207 bp overlap
GATA3 8 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 231 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 272 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 268 bp overlap
ChIP MCF-7 ENCFF437NQS 295 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 246 bp overlap
ChIP MCF-7_DMSO GSE29073.GATA3.MCF-7_DMSO 179 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 267 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 239 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 217 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 159 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 252 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 203 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 202 bp overlap
HIF1A 2 datasets
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 226 bp overlap
HLF 3 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 125 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 193 bp overlap
ChIP liver ENCFF449HPV 201 bp overlap
ChIP liver ERP002306.HNF4A.liver 212 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 170 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 279 bp overlap
JUN 3 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.JUN.MCF-7_Tamoxifen 209 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 228 bp overlap
JUND 4 datasets
ChIP liver ENCFF007WWT 270 bp overlap
ChIP liver ENCFF557PGE 299 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 215 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 215 bp overlap
MAFF 5 datasets
ChIP HeLa-S3 ENCFF783SBT 90 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 150 bp overlap
ChIP HepG2 ENCFF452YUT 119 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 134 bp overlap
ChIP K562 ENCFF071YKK 84 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 266 bp overlap
ChIP K562 ENCFF455EEO 208 bp overlap
MAFK 15 datasets
ChIP A549 ENCFF371EPR 172 bp overlap
ChIP GM12878 ENCFF605LFT 139 bp overlap
ChIP H1 ENCFF854XWE 138 bp overlap
ChIP HeLa-S3 ENCFF304XGR 162 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 105 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 178 bp overlap
ChIP HepG2 ENCFF743ZOF 113 bp overlap
ChIP HepG2 ENCFF767LDG 87 bp overlap
ChIP IMR-90 ENCFF336DHZ 115 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 137 bp overlap
ChIP K562 ENCFF380WHM 88 bp overlap
ChIP MCF-7 ENCFF558JLG 182 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 243 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 206 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 190 bp overlap
MAX 3 datasets
ChIP liver ENCFF092GVW 299 bp overlap
ChIP liver ENCFF092GVW 238 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 171 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 299 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 250 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 233 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap
NFIL3 1 dataset
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
ONECUT1 3 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF243FIR 297 bp overlap
ChIP liver ERP002306.ONECUT1.liver 254 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 141 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 10 datasets
ChIP H1 ENCFF698EWO 194 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 150 bp overlap
ChIP HCT116 ENCFF568PEO 209 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 109 bp overlap
ChIP K562 ENCFF634XYR 234 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 187 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 151 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 156 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 161 bp overlap
ChIP liver ENCFF522JHE 143 bp overlap
RELA 1 dataset
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 191 bp overlap
REST 1 dataset
ChIP liver ENCSR893QWP.REST.liver 129 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 299 bp overlap
ChIP liver ENCFF807CIA 132 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 299 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 219 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 219 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 144 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 252 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 190 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 299 bp overlap
ChIP liver ENCFF769YSM 299 bp overlap
STAT3 1 dataset
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 166 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 233 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 182 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 89 bp overlap
YY1 3 datasets
ChIP liver ENCFF400MBC 299 bp overlap
ChIP liver ENCFF515BWJ 299 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 229 bp overlap
ZBTB33 1 dataset
ChIP liver ENCSR516HUP.ZBTB33.liver 171 bp overlap
ZNF143 3 datasets
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 114 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 212 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF777 1 dataset
ChIP HEK293T GSE78099.ZNF777.HEK293T 70 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
Huangfu Lab · Publications · Resources · Contact