chr10 : 109,993,691 109,994,383
692 bp 83 TFs 0 linked genes
This 692 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:109,988,691 – 109,999,383
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 275 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 173 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 157 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 151 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 181 bp overlap
ChIP K562 ENCFF938UXQ 369 bp overlap
ATF3 3 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 300 bp overlap
ChIP K562 ENCFF604FPV 168 bp overlap
ChIP K562 ENCFF921JQW 405 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 240 bp overlap
BRD4 1 dataset
ChIP NMC24335 GSE96775.BRD4.NMC24335 148 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 154 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 91 bp overlap
EP300 1 dataset
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 226 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 83 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 159 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 305 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 381 bp overlap
ChIP MCF-7_ICI GSE125594.ESR1.MCF-7_ICI 232 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 269 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 381 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 158 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 316 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 194 bp overlap
FOS 3 datasets
ChIP K-562 ENCSR000DKB.FOS.K-562 139 bp overlap
ChIP K-562 ENCSR000FAI.FOS.K-562 129 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 178 bp overlap
FOSL1 3 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 337 bp overlap
ChIP K-562 ENCSR000BMV.FOSL1.K-562 139 bp overlap
ChIP K562 ENCFF455MKD 445 bp overlap
FOSL2 5 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 198 bp overlap
ChIP A549 ENCFF195CES 225 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 112 bp overlap
ChIP SK-N-SH ENCFF127ZDW 199 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 152 bp overlap
FOXA1 25 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 180 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 142 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 302 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 295 bp overlap
ChIP MCF-7 GSE95302.FOXA1.MCF-7 254 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 213 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 227 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 146 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 205 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 175 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 256 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 207 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 196 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 204 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 214 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 268 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 224 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 298 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 233 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 219 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 318 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 388 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 327 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 308 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 231 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 223 bp overlap
ChIP DE DE-FOXA2-1 676 bp overlap
ChIP DE DE-FOXA2-2 692 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 508 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 200 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 267 bp overlap
GATA3 2 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 151 bp overlap
ChIP SK-N-SH ENCFF040SSB 237 bp overlap
GATA4 8 datasets
ChIP A-549 GSE85002.GATA4.A-549 506 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 304 bp overlap
ChIP DE DE-GATA4-1 604 bp overlap
ChIP DE DE-GATA4-2 644 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 594 bp overlap
ChIP foregut GSE117136.GATA4.foregut 610 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 622 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 558 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 544 bp overlap
ChIP AGS GSE51936.GATA6.AGS 173 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 204 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 192 bp overlap
ChIP DE DE-GATA6-1 625 bp overlap
ChIP DE DE-GATA6-2 623 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 468 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 393 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 295 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 532 bp overlap
ChIP foregut GSE117136.GATA6.foregut 556 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 288 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 624 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 531 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 380 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 300 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 85 bp overlap
HOXB13 1 dataset
Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
IRF7 1 dataset
Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap
Irf1 1 dataset
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUN 2 datasets
ChIP K-562 ENCSR000EZT.JUN.K-562 129 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 139 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 141 bp overlap
JUND 7 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 147 bp overlap
ChIP K562 ENCFF336RCR 303 bp overlap
ChIP K562 ENCFF830LVJ 200 bp overlap
ChIP SK-N-SH ENCFF551NEQ 255 bp overlap
ChIP SK-N-SH ENCFF971JKN 182 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 143 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 163 bp overlap
KDM1A 3 datasets
ChIP K562 ENCFF133OLU 369 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 534 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 366 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 190 bp overlap
ChIP K562 ENCFF320GSD 266 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 192 bp overlap
Msgn1 1 dataset
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 442 bp overlap
ChIP K562 ENCFF221HJH 466 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 197 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 238 bp overlap
NR3C1 2 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 238 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 267 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 144 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 136 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 135 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 295 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF607ZPU 325 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
Rarg 1 dataset
Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 575 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 452 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 381 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 308 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 92 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 82 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 98 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 68 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 97 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 247 bp overlap
SOX4 1 dataset
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
STAT1 1 dataset
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
STAT1::STAT2 2 datasets
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
STAT3 1 dataset
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
Stat4 1 dataset
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 259 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
THRA 1 dataset
Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 194 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 217 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 101 bp overlap
ZNF354A 1 dataset
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 2 datasets
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 116 bp overlap
ZNF418 1 dataset
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 196 bp overlap
ZNF669 1 dataset
Motif DE_60h DE_60h-ZNF669_MA1985.1 15 bp overlap
ZNF675 1 dataset
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
ZNF768 1 dataset
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
ZSCAN31 1 dataset
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap