chr10 : 79,454,165 – 79,454,609
444 bp 64 TFs 1 linked gene
This 444 bp open chromatin element is linked to ZCCHC24 and is bound by 64 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZCCHC24 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:79,449,165 – 79,459,609
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 3 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 204 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 285 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 103 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 321 bp overlap
ARNT 1 dataset
ChIP RCC4 GSE85352.ARNT.RCC4 298 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 204 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 184 bp overlap
BRD2 3 datasets
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 205 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 311 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 220 bp overlap
BRD3 1 dataset
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 169 bp overlap
BRD4 7 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 217 bp overlap
ChIP HEK293_sgMYOD GSE129407.BRD4.HEK293_sgMYOD 302 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 271 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 444 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 196 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 215 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 65 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 262 bp overlap
CEBPB 3 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 302 bp overlap
ChIP IMR-90 ENCFF468UGY 123 bp overlap
ChIP hMSC GSE68864.CEBPB.hMSC 96 bp overlap
CEBPD 1 dataset
ChIP HAEC_IL1b_4h GSE89970.CEBPD.HAEC_IL1b_4h 97 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 239 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 176 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 224 bp overlap
ChIP BLaER1 ENCFF335XTP 358 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 158 bp overlap
E2F1 2 datasets
ChIP HMEC-1 GSE62425.E2F1.HMEC-1 264 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 160 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 111 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 182 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 427 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 137 bp overlap
EP300 2 datasets
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 88 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 162 bp overlap
ERG 5 datasets
ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 223 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 144 bp overlap
ChIP aortic-endothelial-cell_D21 GSE139377.ERG.aortic-endothelial-cell_D21 166 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 220 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 187 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 119 bp overlap
EZH2 2 datasets
ChIP endothelial cell of umbilical vein ENCFF539AKL 444 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 251 bp overlap
FOS 4 datasets
ChIP IMR-90 ENCFF179EDA 207 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 136 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 130 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 69 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 245 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 241 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 364 bp overlap
ChIP DE DE-GATA4-2 406 bp overlap
ChIP foregut GSE117136.GATA4.foregut 397 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 280 bp overlap
GATA6 7 datasets
ChIP AGS GSE51705.GATA6.AGS 263 bp overlap
ChIP DE DE-GATA6-1 375 bp overlap
ChIP DE DE-GATA6-2 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 358 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 366 bp overlap
ChIP foregut GSE117136.GATA6.foregut 401 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 237 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 196 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 164 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 252 bp overlap
ChIP K562 ENCFF348IBL 444 bp overlap
ChIP K562 ENCFF771OHZ 444 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 199 bp overlap
JUN 3 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 117 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 444 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 148 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 154 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 140 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 206 bp overlap
MED1 10 datasets
ChIP SGBS GSE64233.MED1.SGBS 237 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 233 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 325 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 183 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 241 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 293 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 226 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 218 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 184 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 233 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 329 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 119 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 204 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 198 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 219 bp overlap
ChIP K562 ENCFF167YID 309 bp overlap
NFKB1 2 datasets
ChIP MCF10A-Er-Src_EtOH GSE115597.NFKB1.MCF10A-Er-Src_EtOH 103 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 143 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF565JGD 442 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 347 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 245 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 179 bp overlap
POLR2A 5 datasets
ChIP esophagus muscularis mucosa ENCFF791ZXN 369 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 90 bp overlap
ChIP sigmoid colon ENCFF748YVT 291 bp overlap
ChIP sigmoid colon ENCFF754JQR 228 bp overlap
ChIP stomach ENCFF820WZN 116 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 295 bp overlap
RELA 16 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 347 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 121 bp overlap
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 152 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 383 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 281 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 328 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 215 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 98 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 399 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 138 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 285 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 129 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 172 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 110 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 444 bp overlap
RUNX1 1 dataset
ChIP keratinocyte GSE98483.RUNX1.keratinocyte 146 bp overlap
RUVBL2 1 dataset
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 122 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 339 bp overlap
SMAD3 2 datasets
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 197 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 208 bp overlap
SMAD3-HIF1A 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 223 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 181 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 331 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 142 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 388 bp overlap
STAT3 9 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 152 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 210 bp overlap
ChIP HCC1937 GSE152203.STAT3.HCC1937 73 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 111 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 296 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 153 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 234 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 181 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 254 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 257 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 227 bp overlap
TP63 10 datasets
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 139 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 177 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 128 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 140 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 222 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 211 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 197 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 190 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 174 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 113 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 168 bp overlap
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